RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GALNT1Q10472 559 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TBL3Q12788 808 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 RALGDSQ12967 914 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 BLMHQ13867 455 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ACAP2Q15057 778 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 UBE3CQ15386 1083 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 STILQ15468 1287 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CNGA2Q16280 664 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HADHQ16836 314 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KLHL40Q2TBA0 621 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CLVS2Q5SYC1 327 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF658Q5TYW1 1059 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HAUS3Q68CZ6 603 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM122CQ6P4D5 195 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GGT6Q6P531 493 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GALNT18Q6P9A2 607 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TTC23LQ6PF05 361 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP2R1Q6VVX0 501 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NSMFQ6X4W1 530 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR155Q7Z3F1 870 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CTAGE6Q86UF2 777 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERICH1Q86X53 443 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PALB2Q86YC2 1186 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CTAGE4Q8IX94 777 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CISD2Q8N5K1 135 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CCNYL1Q8N7R7 359 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NIPA2Q8N8Q9 360 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 OR56B2PQ8NGI1 322 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FEZF2Q8TBJ5 459 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM216AQ8WUB2 273 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ZBTB8AQ96BR9 441 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 METTL2AQ96IZ6 378 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM84AQ96KN4 292 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CLUHP3Q96NS8 147 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NT5C1BQ96P26 610 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PPP1R10Q96QC0 940 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NDNQ99608 321 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC77Q9BR77 488 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TRIM62Q9BVG3 475 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR12Q9GZL7 423 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ZCWPW1Q9H0M4 648 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SNX25Q9H3E2 840 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLPH3LQ9H4A5 285 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC52A2Q9HAB3 445 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TUFT1Q9NNX1 390 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KLC4Q9NSK0 619 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NMRK1Q9NWW6 199 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ARHGEF38Q9NXL2 777 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MRPL39Q9NYK5 338 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 AASSQ9UDR5 926 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TRPS1Q9UHF7 1281 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC7A8Q9UHI5 535 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ANGPTL2Q9UKU9 493 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERVK-19Q9WJR5 959 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 STON1Q9Y6Q2 735 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TTC21AQ8NDW8 1320 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SBNO1A3KN83 1393 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A0B4J269 797 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8QA0A0J9YX86 632 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 LOC100653049A0A140TA62 436 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1W2PQ67 120 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 HEATR9A2RTY3 570 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8OA6NCC3 632 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT87PA6NCN2 255 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ERVV-2B6SEH9 535 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8NF8WBI6 632 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 N4BP3O15049 544 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FOXP2O15409 715 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 MGRN1O60291 552 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PQBP1O60828 265 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SMPD2O60906 423 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SRGAP2O75044 1071 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 IDH1O75874 414 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT34O76011 436 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SLU7O95391 586 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CRTAMO95727 393 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 IFNA14P01570 189 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT7P08729 469 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM253P0C7T8 217 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CHRNB1P11230 501 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 RHCEP18577 417 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 SDSP20132 328 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TTKP33981 857 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 IL6STP40189 918 aaPredicted RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 FXR1P51114 621 aaKnown RBP eCLIP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 NEK4P51957 841 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CARD18P57730 90 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 RHDQ02161 417 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 ENPEPQ07075 957 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 KCNAB2Q13303 367 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 GRB10Q13322 594 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 DMC1Q14565 340 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 EPHA7Q15375 998 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 TAF5Q15542 800 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PDCD4Q53EL6 469 aaKnown RBP3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP4A22Q5TCH4 519 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 VWA5B1Q5TIE3 1220 aa3.23□□□□□ -1.89
SNRNP48-202ENST00000496946 PKN3Q6P5Z2 889 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms