RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 FKTNO75072 461 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PARNO95453 639 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 FAM107AO95990 144 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CPP00450 1065 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 POMCP01189 267 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CD48P09326 243 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 NCAM1P13591 858 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CHN1P15882 459 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TPSB2P20231 275 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 MX2P20592 715 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TKTP29401 623 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 HTR7P34969 479 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RPL22P35268 128 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 MMP13P45452 471 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GEMIN4P57678 1058 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 DAOAP59103 153 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 COG7P83436 770 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CDK16Q00536 496 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 IL9RQ01113 521 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 YWHAHQ04917 246 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 NME3Q13232 169 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 DSC3Q14574 896 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PDK1Q15118 436 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RASA2Q15283 850 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TPSAB1Q15661 275 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 NFE2Q16621 373 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 UPP1Q16831 310 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 BBS9Q3SYG4 887 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CCDC38Q502W7 563 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ZC3H12AQ5D1E8 599 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 MAP3K21Q5TCX8 1036 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 LGSNQ5TDP6 509 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ZNF697Q5TEC3 545 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 ANKS1BQ7Z6G8 1248 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TADA2BQ86TJ2 420 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 NLRP14Q86W24 1093 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 NAT8LQ8N9F0 302 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 FAM71DQ8N9W8 422 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RNF139Q8WU17 664 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GLMNQ92990 594 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 MYLPFQ96A32 169 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ALKBH8Q96BT7 664 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 RTP4Q96DX8 246 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 CHMP6Q96FZ7 201 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PCED1BQ96HM7 432 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 SGSM3Q96HU1 749 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PIWIL1Q96J94 861 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 SUSD3Q96L08 255 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 C9orf72Q96LT7 481 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PPP1R2P1Q96PQ5 205 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 QKIQ96PU8 341 aaKnown RBP eCLIP7.16□□□□□ -1.26
USP39-219ENST00000496047 SLC2A13Q96QE2 648 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 MRPL9Q9BYD2 267 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 B3GNT5Q9BYG0 378 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 ULBP1Q9BZM6 244 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 EPB41L4BQ9H329 900 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 XAB2Q9HCS7 855 aaKnown RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 KCNK9Q9NPC2 374 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 PRDM6Q9NQX0 595 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RAB6BQ9NRW1 208 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RGS18Q9NS28 235 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 DONSONQ9NYP3 566 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 MAP10Q9P2G4 905 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 RSPH14Q9UHP6 348 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 SLC12A6Q9UHW9 1150 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GGA2Q9UJY4 613 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 GRIN2DO15399 1336 aa7.16□□□□□ -1.26
USP39-219ENST00000496047 COL4A4P53420 1690 aaPredicted RBP7.16□□□□□ -1.26
USP39-219ENST00000496047 LTBP2Q14767 1821 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 KIAA1671Q9BY89 1806 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 OBSL1O75147 1896 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 MYLKQ15746 1914 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ANAPC1Q9H1A4 1944 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 SYNJ2BP-COX16A0A087WUM0 186 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 A0A1W2PQ45 241 aaPredicted RBP7.15□□□□□ -1.26
USP39-219ENST00000496047 A0A1W2PQY0 241 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CARNS1A5YM72 827 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 RASA4BC9J798 803 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 E7ESA3 106 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 POC1B-GALNT4F8VUJ3 575 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ARVCFO00192 962 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CLDN5O00501 218 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 SYN3O14994 580 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 INPPL1O15357 1258 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 PSMD3O43242 534 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 RASA4O43374 803 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CREB3O43889 395 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 OPHN1O60890 802 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 AOC2O75106 756 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 NEBLO76041 1014 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 INHAP05111 366 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 INHBAP08476 426 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ZSCAN5DPP0CG00 497 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 CKBP12277 381 aa7.15□□□□□ -1.26
USP39-219ENST00000496047 ETS1P14921 441 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms