RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 ANO7Q6IWH7 933 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 DDI1Q8WTU0 396 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 DDX1Q92499 740 aaKnown RBP17.99■□□□□ 0.47
CTNS-207ENST00000495445 SERPINB11Q96P15 392 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 TRIM62Q9BVG3 475 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 VPS16Q9H269 839 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 HSD3B7Q9H2F3 369 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 SPAG17Q6Q759 2223 aa17.99■□□□□ 0.47
CTNS-207ENST00000495445 SDK1Q7Z5N4 2213 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 NPC1O15118 1278 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 ACSL4O60488 711 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 EPN2O95208 641 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 CYP11B1P15538 503 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 ZNF18P17022 549 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 KRT9P35527 623 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 TMEM215Q68D42 235 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.98■□□□□ 0.47
CTNS-207ENST00000495445 FAM149B1Q96BN6 582 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 SLC2A13Q96QE2 648 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 LSM14BQ9BX40 385 aaKnown RBP17.98■□□□□ 0.47
CTNS-207ENST00000495445 GANQ9H2C0 597 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 ELOVL2Q9NXB9 296 aa17.98■□□□□ 0.47
CTNS-207ENST00000495445 THAP10Q9P2Z0 257 aaPredicted RBP17.98■□□□□ 0.47
CTNS-207ENST00000495445 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
CTNS-207ENST00000495445 GOLGA6L7A0A1B0GV03 622 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 PES1O00541 588 aaKnown RBP17.97■□□□□ 0.47
CTNS-207ENST00000495445 IRAK2O43187 625 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 TIMM44O43615 452 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 TSPAN3O60637 253 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 SLC6A4P31645 630 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 P2RY2P41231 377 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 SLC11A2P49281 568 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 SGSHP51688 502 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 CSRP2Q16527 193 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 EFHC1Q5JVL4 640 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 PLA2G2CQ5R387 149 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 NADSYN1Q6IA69 706 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 APTXQ7Z2E3 356 aaKnown RBP17.97■□□□□ 0.47
CTNS-207ENST00000495445 TAC4Q86UU9 113 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 C11orf74Q86VG3 221 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 PASD1Q8IV76 773 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 ABCA7Q8IZY2 2146 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.97■□□□□ 0.47
CTNS-207ENST00000495445 RMDN1Q96DB5 314 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 LMLNQ96KR4 655 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 TPSD1Q9BZJ3 242 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 SEMA4GQ9NTN9 838 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 DLL3Q9NYJ7 618 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 SIK3Q9Y2K2 1263 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 PCDHGA5Q9Y5G8 931 aa17.97■□□□□ 0.47
CTNS-207ENST00000495445 CEP250Q9BV73 2442 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 WASH3PC4AMC7 463 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 CAPN9O14815 690 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 RHOBTB1O94844 696 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 TRUB2O95900 331 aaKnown RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 ERBB2P04626 1255 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 HOXB2P14652 356 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 GABRG2P18507 467 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 HLA-FP30511 346 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 WASP42768 502 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 GABRB2P47870 512 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 ID4P47928 161 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 COPB1P53618 953 aaKnown RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 MYL5Q02045 173 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 RAPGEF1Q13905 1077 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 EIF4HQ15056 248 aaKnown RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 MAP7D1Q3KQU3 841 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 PTPN20Q4JDL3 420 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 SDE2Q6IQ49 451 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 RFWD3Q6PCD5 774 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 OLFML1Q6UWY5 402 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 ANKS1BQ7Z6G8 1248 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 CHPFQ8IZ52 775 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 C1orf131Q8NDD1 294 aaKnown RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 ZNF397Q8NF99 534 aaPredicted RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 ADAM32Q8TC27 787 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 IPO4Q8TEX9 1081 aaKnown RBP17.96■□□□□ 0.47
CTNS-207ENST00000495445 NOX5Q96PH1 765 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 ARRDC1-AS1Q9H2J1 176 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 INVSQ9Y283 1065 aa17.96■□□□□ 0.47
CTNS-207ENST00000495445 TCRBV21S2A2A0A5A6 115 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 PRR5-ARHGAP8B1AHC4 643 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 F8VZ95 297 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 ZNF806P0C7X5 589 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 C7P10643 843 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 KLK7P49862 253 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 JAM2P57087 298 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 SNX16P57768 344 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
CTNS-207ENST00000495445 ARHGAP8P85298 464 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 SLC6A3Q01959 620 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 TYRO3Q06418 890 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 PMS2CLQ68D20 193 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 KIAA1211LQ6NV74 962 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 FAM183BPQ6ZVS7 135 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 SLC26A9Q7LBE3 791 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 DEFB106AQ8N104 65 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 HMGB4Q8WW32 186 aa17.95■□□□□ 0.46
CTNS-207ENST00000495445 MYEOVQ96EZ4 313 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms