RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 DCP1AQ9NPI6 582 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GSTTP1A0A1W2PQM5 241 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SYCE1LA8MT33 242 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 EVPLLA8MZ36 301 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 B8ZZF3 427 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HAT1O14929 419 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TEX28O15482 410 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HTRA2O43464 458 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TBCAO75347 108 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RFPL1O75677 317 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GCP02774 474 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PROCP04070 461 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HSPA1AP0DMV8 641 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HSPA1BP0DMV9 641 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RALBP11234 206 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 IMPDH1P20839 514 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TCEA1P23193 301 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GRK2P25098 689 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GABRB2P47870 512 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CASP4P49662 377 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 UBAP2LQ14157 1087 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 DLG2Q15700 870 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NFE2Q16621 373 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CBWD6Q4V339 395 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CBWD3Q5JTY5 395 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CBWD5Q5RIA9 395 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ERAP2Q6P179 960 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KIF6Q6ZMV9 814 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 IDO2Q6ZQW0 420 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MAVSQ7Z434 540 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SLC26A11Q86WA9 606 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RIOX2Q8IUF8 465 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 WDR75Q8IWA0 830 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MFSD4AQ8N468 514 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RP9Q8TA86 221 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ATG4AQ8WYN0 398 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 FAM111AQ96PZ2 611 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 FIZ1Q96SL8 496 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TRAF4Q9BUZ4 470 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SHCBP1LQ9BZQ2 653 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ZC3H12CQ9C0D7 883 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 VPS37BQ9H9H4 285 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SIAEQ9HAT2 523 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HMG20AQ9NP66 347 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ENPP5Q9UJA9 477 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PSME2Q9UL46 239 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RABL2BQ9UNT1 228 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TESMINQ9Y4I5 508 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF831Q5JPB2 1677 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 OR5K3A6NET4 321 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGAP42A6NI28 874 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 POTEMA6NI47 508 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KLHL41O60662 606 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SNHG28P0DPA3 235 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PRKCAP17252 672 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CCNA2P20248 432 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CD247P20963 164 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TBXAS1P24557 533 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HPCAL1P37235 193 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 IDH3AP50213 366 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HLCSP50747 726 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NAPAP54920 295 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 P2RX3P56373 397 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GNG2P59768 71 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 YWHAGP61981 247 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PRKCQQ04759 706 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PPP3CAQ08209 521 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RAB39AQ14964 217 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GRIK5Q16478 980 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 INSCQ1MX18 579 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 LRRC36Q1X8D7 754 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SLC36A3Q495N2 470 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SPATS1Q496A3 300 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NXNQ6DKJ4 435 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TUBA3EQ6PEY2 450 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 C4orf22Q6V702 233 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RFX8Q6ZV50 586 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PRSS48Q7RTY5 328 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HEATR3Q7Z4Q2 680 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ARID3BQ8IVW6 561 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SLFN12Q8IYM2 578 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 DEFB107AQ8IZN7 70 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GIPC2Q8TF65 315 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ASB9Q96DX5 294 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MAGED4Q96JG8 741 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 B3GNT4Q9C0J1 378 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MRM3Q9HC36 420 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 XAB2Q9HCS7 855 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 A0A1B0GTW7 788 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TEX51A0A1B0GUA7 166 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 C2orf71A6NGG8 1288 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 DLGAP1O14490 977 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 COPEO14579 308 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HOXC11O43248 304 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GUCY1B2O75343 617 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MCF2P10911 925 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 EPHA3P29320 983 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ECE1P42892 770 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms