RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FAM71AQ8IYT1 594 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 PPP1R13BQ96KQ4 1090 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 CPXM1Q96SM3 734 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 RAD54BQ9Y620 910 aa34.56■■■■□ 3.12
CBX4-203ENST00000494546 GOLGA6L7A0A1B0GV03 622 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 A0A1W2PQF6 199 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 MBD3O95983 291 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 RFWD3Q6PCD5 774 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 TAC4Q86UU9 113 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 C1orf131Q8NDD1 294 aaKnown RBP34.55■■■■□ 3.12
CBX4-203ENST00000494546 UCMAQ8WVF2 138 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 SPACA7Q96KW9 195 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 NOX5Q96PH1 765 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 GABRG3Q99928 467 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 VPS16Q9H269 839 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 LHX5Q9H2C1 402 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 POPDC2Q9HBU9 364 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 ANO10Q9NW15 660 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 TLR6Q9Y2C9 796 aa34.55■■■■□ 3.12
CBX4-203ENST00000494546 SDK1Q7Z5N4 2213 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 GFRA2O00451 464 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 ZBTB24O43167 697 aaPredicted RBP34.54■■■■□ 3.12
CBX4-203ENST00000494546 ACSL4O60488 711 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 GABRG2P18507 467 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 YWHAZP63104 245 aaKnown RBP34.54■■■■□ 3.12
CBX4-203ENST00000494546 STX1AQ16623 288 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 CDKAL1Q5VV42 579 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 KIAA1211LQ6NV74 962 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 BEND5Q7L4P6 421 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 IPO4Q8TEX9 1081 aaKnown RBP34.54■■■■□ 3.12
CBX4-203ENST00000494546 FCRL2Q96LA5 508 aaPredicted RBP34.54■■■■□ 3.12
CBX4-203ENST00000494546 FANCLQ9NW38 375 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 PCDHGA5Q9Y5G8 931 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 SPAG17Q6Q759 2223 aa34.54■■■■□ 3.12
CBX4-203ENST00000494546 SPTBN4Q9H254 2564 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 WASH3PC4AMC7 463 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 TPM2P07951 284 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 P2RY2P41231 377 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 SGSHP51688 502 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 BPIFB4P59827 614 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 NNTQ13423 1086 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 KRT31Q15323 416 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 TAF5Q15542 800 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 CCDC183Q5T5S1 534 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 CIPCQ9C0C6 399 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 PLCB1Q9NQ66 1216 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 CDV3Q9UKY7 258 aaKnown RBP34.53■■■■□ 3.12
CBX4-203ENST00000494546 STON1Q9Y6Q2 735 aa34.53■■■■□ 3.12
CBX4-203ENST00000494546 UCHL3P15374 230 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 SLC6A4P31645 630 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 MPLP40238 635 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 CREB5Q02930 508 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 PUM1Q14671 1186 aaKnown RBP eCLIP34.52■■■■□ 3.121e-11■□□□□ 10.1
CBX4-203ENST00000494546 FAM133BQ5BKY9 247 aaKnown RBP34.52■■■■□ 3.12
CBX4-203ENST00000494546 PMS2CLQ68D20 193 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 FRMD1Q8N878 549 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 AZIN2Q96A70 460 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 PDCL3Q9H2J4 239 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 ELOVL2Q9NXB9 296 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 DLL3Q9NYJ7 618 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 THAP10Q9P2Z0 257 aaPredicted RBP34.52■■■■□ 3.12
CBX4-203ENST00000494546 CEP83Q9Y592 693 aa34.52■■■■□ 3.12
CBX4-203ENST00000494546 DMXL1Q9Y485 3027 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 MAP3K13O43283 966 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 MOCS2O96007 188 aaPredicted RBP34.51■■■■□ 3.12
CBX4-203ENST00000494546 BYSLQ13895 437 aaKnown RBP34.51■■■■□ 3.12
CBX4-203ENST00000494546 SF3A2Q15428 464 aaKnown RBP34.51■■■■□ 3.12
CBX4-203ENST00000494546 PIK3R6Q5UE93 754 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 NADSYN1Q6IA69 706 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 SLC39A13Q96H72 371 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 DDX50Q9BQ39 737 aaKnown RBP34.51■■■■□ 3.12
CBX4-203ENST00000494546 NAA15Q9BXJ9 866 aaKnown RBP34.51■■■■□ 3.12
CBX4-203ENST00000494546 SMOC1Q9H4F8 434 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 SYNCQ9H7C4 482 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 CALCOCO1Q9P1Z2 691 aa34.51■■■■□ 3.12
CBX4-203ENST00000494546 RALGAPA1Q6GYQ0 2036 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 LOC105378220A0A1B0GUY1 285 aaPredicted RBP34.5■■■■□ 3.11
CBX4-203ENST00000494546 TBL1XO60907 577 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 ARID5AQ03989 594 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 EIF4HQ15056 248 aaKnown RBP34.5■■■■□ 3.11
CBX4-203ENST00000494546 MAP7D1Q3KQU3 841 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 DCAF6Q58WW2 860 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 OR6B2Q6IFH4 312 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 C12orf50Q8NA57 414 aaPredicted RBP34.5■■■■□ 3.11
CBX4-203ENST00000494546 SORCS1Q8WY21 1168 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 CD248Q9HCU0 757 aa34.5■■■■□ 3.11
CBX4-203ENST00000494546 IRAK2O43187 625 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 FOXD2O60548 495 aaPredicted RBP34.49■■■■□ 3.11
CBX4-203ENST00000494546 TRUB2O95900 331 aaKnown RBP34.49■■■■□ 3.11
CBX4-203ENST00000494546 ZNF806P0C7X5 589 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 CYP11B1P15538 503 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 NDUFV2P19404 249 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 SDHBP21912 280 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 HLA-FP30511 346 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 IL12RB1P42701 662 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 DHPSP49366 369 aaPredicted RBP34.49■■■■□ 3.11
CBX4-203ENST00000494546 STARD3Q14849 445 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 EFHC1Q5JVL4 640 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 TMEM215Q68D42 235 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 FAM183BPQ6ZVS7 135 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 350.5 ms