RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 FCRL2Q96LA5 508 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-212ENST00000493940 CPXM1Q96SM3 734 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 GABRG3Q99928 467 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 ST7Q9NRC1 585 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 OLA1Q9NTK5 396 aaKnown RBP13.15□□□□□ -0.3
HSPG2-212ENST00000493940 ZNF510Q9Y2H8 683 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 SLC27A6Q9Y2P4 619 aa13.15□□□□□ -0.3
HSPG2-212ENST00000493940 TP53BP1Q12888 1972 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 PATE3B3GLJ2 98 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 KCNJ18B7U540 433 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 LRP3O75074 770 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 HLA-FP30511 346 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 GBP1P32455 592 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 USP8P40818 1118 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 IL12RB1P42701 662 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 KLK7P49862 253 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 KCNJ12Q14500 433 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 ADGRF1Q5T601 910 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 PMS2CLQ68D20 193 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 TAC4Q86UU9 113 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 TMEFF1Q8IYR6 380 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 DQX1Q8TE96 717 aaKnown RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 IPO4Q8TEX9 1081 aaKnown RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 DDI1Q8WTU0 396 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 SLC39A13Q96H72 371 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 LOXL4Q96JB6 756 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 LMLNQ96KR4 655 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
HSPG2-212ENST00000493940 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 TMEM131Q92545 1883 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 SPEGQ15772 3267 aa13.14□□□□□ -0.31
HSPG2-212ENST00000493940 ACACBO00763 2458 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 ADRB1P08588 477 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 ZNF806P0C7X5 589 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 NCAM1P13591 858 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 HOXB2P14652 356 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 NDUFV2P19404 249 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 MPLP40238 635 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 PTGER3P43115 390 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 TBX4P57082 545 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 ENPP2Q13822 863 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 USP39Q53GS9 565 aaKnown RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 TCP11X2Q5H9J9 407 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 ENOSF1Q7L5Y1 443 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 CCDC26Q8TAB7 109 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 HSD3B7Q9H2F3 369 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 TAB2Q9NYJ8 693 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 THAP10Q9P2Z0 257 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-212ENST00000493940 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 STON1Q9Y6Q2 735 aa13.13□□□□□ -0.31
HSPG2-212ENST00000493940 SLC30A4O14863 429 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 TM4SF5O14894 197 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 EPHB6O15197 1021 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ACSL4O60488 711 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 GRAP2O75791 330 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 FBXO21O94952 628 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ERBB2P04626 1255 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 TFE3P19532 575 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 PRKCHP24723 683 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 CD70P32970 193 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 CREB5Q02930 508 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 PDCLQ13371 301 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ZNF234Q14588 700 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ADIPOR2Q86V24 386 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 FAM71AQ8IYT1 594 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 PGBD3Q8N328 593 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
HSPG2-212ENST00000493940 C1orf131Q8NDD1 294 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
HSPG2-212ENST00000493940 NETO1Q8TDF5 533 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms