RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 CXCR3P49682 368 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 NNTQ13423 1086 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 IFI16Q16666 785 aaKnown RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 SMTNL2Q2TAL5 461 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 TRIM68Q6AZZ1 485 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 TTC8Q8TAM2 541 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 CENPIQ92674 756 aaPredicted RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 E2F7Q96AV8 911 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 ELSPBP1Q96BH3 223 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 PGAP3Q96FM1 320 aaPredicted RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 SLC39A13Q96H72 371 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 DCLK3Q9C098 648 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 TRPV4Q9HBA0 871 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 THG1LQ9NWX6 298 aaKnown RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 DUS2Q9NX74 493 aaKnown RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 AGO1Q9UL18 857 aaKnown RBP16.35■□□□□ 0.21
HPS4-216ENST00000493455 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
HPS4-216ENST00000493455 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ACSL4O60488 711 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 TSPAN3O60637 253 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 PAGE1O75459 146 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ECI2O75521 394 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 PALMO75781 387 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 IGLV3-27P01718 113 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 PSMC3P17980 439 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 COMTP21964 271 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 WEE1P30291 646 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 SLC11A2P49281 568 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ZP2Q05996 745 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 RING1Q06587 406 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 PPP2R5DQ14738 602 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 BRMS1LQ5PSV4 323 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 CHSY1Q86X52 802 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 MFSD6LQ8IWD5 586 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ZDHHC14Q8IZN3 488 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ARFGAP1Q8N6T3 406 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 HSPH1Q92598 858 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 BHMTQ93088 406 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 LINC00597Q9H2U6 94 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 KCNK12Q9HB15 430 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 ANLNQ9NQW6 1124 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 OBP2AQ9NY56 170 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 LCMT1Q9UIC8 334 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 USP18Q9UMW8 372 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 TICRRQ7Z2Z1 1910 aa16.34■□□□□ 0.21
HPS4-216ENST00000493455 GRID2IPA4D2P6 1211 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 KCNU1A8MYU2 1149 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 ANHXE9PGG2 379 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 ENDOD1O94919 500 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 DNA2P51530 1060 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 TAS2R40P59535 323 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 ACAP1Q15027 740 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 TCEAL1Q15170 157 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 HADHQ16836 314 aaKnown RBP16.33■□□□□ 0.2
HPS4-216ENST00000493455 EFHC2Q5JST6 749 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 KCNT1Q5JUK3 1230 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 TPGS1Q6ZTW0 290 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 HTR3DQ70Z44 454 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 BNIPLQ7Z465 357 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 SLFN11Q7Z7L1 901 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 REXO1L1PQ8IX06 675 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 CCAR2Q8N163 923 aaKnown RBP16.33■□□□□ 0.2
HPS4-216ENST00000493455 NIPA2Q8N8Q9 360 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 DEPDC1BQ8WUY9 529 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 ASIC4Q96FT7 647 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 BTN2A3PQ96KV6 586 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 SNRNP25Q9BV90 132 aaKnown RBP16.33■□□□□ 0.2
HPS4-216ENST00000493455 TRMT61BQ9BVS5 477 aaKnown RBP16.33■□□□□ 0.2
HPS4-216ENST00000493455 MAGEB5Q9BZ81 275 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 EBF3Q9H4W6 596 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
HPS4-216ENST00000493455 BRD9Q9H8M2 597 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 ARHGEF38Q9NXL2 777 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 PRKAG3Q9UGI9 489 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 AP4E1Q9UPM8 1137 aa16.33■□□□□ 0.2
HPS4-216ENST00000493455 SLC9A3R1O14745 358 aaPredicted RBP16.32■□□□□ 0.2
HPS4-216ENST00000493455 GREM1O60565 184 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 SRGAP2O75044 1071 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 FTCDO95954 541 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 BMP1P13497 986 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 ARSAP15289 507 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 TCF3P15923 654 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 TACR2P21452 398 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 IL1R2P27930 398 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 MAN1A1P33908 653 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 ADRA1BP35368 520 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 HADHBP55084 474 aaKnown RBP16.32■□□□□ 0.2
HPS4-216ENST00000493455 EIF4EBP2Q13542 120 aaPredicted RBP16.32■□□□□ 0.2
HPS4-216ENST00000493455 PIK3R6Q5UE93 754 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 TXNRD3NBQ6F5E7 133 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 NADSYN1Q6IA69 706 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
HPS4-216ENST00000493455 Q6ZNB5 142 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms