RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 KIF11P52732 1056 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 JAM2P57087 298 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 NTHL1P78549 312 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 VEPH1Q14D04 833 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 DDR2Q16832 855 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 FIGNQ5HY92 759 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PM20D1Q6GTS8 502 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PSAPL1Q6NUJ1 521 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PRR23CQ6ZRP0 262 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 CLEC20AQ6ZU45 233 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 DENND5BQ6ZUT9 1274 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 NPAS3Q8IXF0 933 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 NUP93Q8N1F7 819 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ELMOD1Q8N336 334 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PPM1KQ8N3J5 372 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 AOPEPQ8N6M6 819 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ITFG1Q8TB96 612 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 SHKBP1Q8TBC3 707 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 SLC2A14Q8TDB8 520 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ZNF606Q8WXB4 792 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 KCTD13Q8WZ19 329 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 TFAP2BQ92481 460 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ACSF2Q96CM8 615 aaPredicted RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 HEXIM2Q96MH2 286 aaKnown RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 MYADMQ96S97 322 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 EDEM3Q9BZQ6 932 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 GANQ9H2C0 597 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 LHX5Q9H2C1 402 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 EPC1Q9H2F5 836 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ACBD3Q9H3P7 528 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 TBC1D17Q9HA65 648 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PIDD1Q9HB75 910 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ZNF334Q9HCZ1 680 aaPredicted RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 DMAP1Q9NPF5 467 aaPredicted RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 TRPV5Q9NQA5 729 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 SEMA4GQ9NTN9 838 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 IGSF9Q9P2J2 1179 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 MYO6Q9UM54 1294 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS52-219ENST00000493379 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 PATJQ8NI35 1801 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 SDK1Q7Z5N4 2213 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ATP8B3O60423 1300 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ZNF840PA6NDX5 716 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ECI2O75521 394 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TADA3O75528 432 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SOAT2O75908 522 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 RTN3O95197 1032 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 MAP3K6O95382 1288 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 FAM200BP0CF97 657 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 CD58P19256 250 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 CDK11BP21127 795 aaKnown RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 FCARP24071 287 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 GSTT1P30711 240 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 CDH5P33151 784 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 GRIK1P39086 918 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 GPR15P49685 360 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TUBP50607 506 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 MLLT6P55198 1093 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 BPIFB4P59827 614 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 CYP27A1Q02318 531 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 HTR4Q13639 388 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ZNF268Q14587 947 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SGO2Q562F6 1265 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 KLHDC10Q6PID8 442 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TMEM270Q6UE05 265 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SCARA5Q6ZMJ2 495 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 PDZD4Q76G19 769 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 BEND5Q7L4P6 421 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TMEM110Q86TL2 294 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 LUZP1Q86V48 1076 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 MON1AQ86VX9 555 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TTC30AQ86WT1 665 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SLC44A3Q8N4M1 653 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ANKRD20A12PQ8NF67 263 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ATRIPQ8WXE1 791 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 DDX1Q92499 740 aaKnown RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 E2F7Q96AV8 911 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ZNF837Q96EG3 531 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 TCEAL4Q96EI5 215 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ABHD17AQ96GS6 310 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 HSFY1Q96LI6 401 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 NAP1L5Q96NT1 182 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 SEPT5Q99719 369 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 SLC30A3Q99726 388 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SCNM1Q9BWG6 230 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 SLC46A2Q9BY10 475 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 VPS16Q9H269 839 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 FBXO44Q9H4M3 255 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TASP1Q9H6P5 420 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 KCNK12Q9HB15 430 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 ASAH2Q9NR71 780 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 TAB2Q9NYJ8 693 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 DNAJC12Q9UKB3 198 aa7.09□□□□□ -1.27
VPS52-219ENST00000493379 AJAP1Q9UKB5 411 aaPredicted RBP7.09□□□□□ -1.27
VPS52-219ENST00000493379 CA14Q9ULX7 337 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms