RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PLEKHG6Q3KR16 790 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 KIAA1324Q6UXG2 1013 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 RAB44Q7Z6P3 723 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 TMPRSS6Q8IU80 811 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 RGL4Q8IZJ4 473 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 SEMA4DQ92854 862 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 AZIN2Q96A70 460 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 JAKMIP2Q96AA8 810 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 SIPA1Q96FS4 1042 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 SGSM3Q96HU1 749 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 GSDMAQ96QA5 445 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 ABCC13Q9NSE7 274 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 KIAA1522Q9P206 1035 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 HESX1Q9UBX0 185 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 NUDT5Q9UKK9 219 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 PCDHGB2Q9Y5G2 931 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 RAD54BQ9Y620 910 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 THADAQ6YHU6 1953 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 ATXN2Q99700 1313 aaKnown RBP9.55□□□□□ -0.88
HDAC3-212ENST00000492407 NUP205Q92621 2012 aa9.55□□□□□ -0.88
HDAC3-212ENST00000492407 SPAARA0A1B0GVQ0 90 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 SLC12A8A0AV02 714 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 WASH3PC4AMC7 463 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 IRAK2O43187 625 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 SETSIPP0DME0 302 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ACADMP11310 421 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 VDRP11473 427 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 IL12RB1P42701 662 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 TPMTP51580 245 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 BST2Q10589 180 aaKnown RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 CAMK2GQ13555 558 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF234Q14588 700 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 GEN1Q17RS7 908 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ADGRF1Q5T601 910 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 DBX2Q6ZNG2 339 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 KIAA0907Q7Z7F0 614 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 DENND1CQ8IV53 801 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 DEFB119Q8N690 84 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 OR2T3Q8NH03 318 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 RNF139Q8WU17 664 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ADAMTS14Q8WXS8 1223 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 IRGQQ8WZA9 623 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 GOLGA1Q92805 767 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 TOE1Q96GM8 510 aaKnown RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 TSG101Q99816 390 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 MKRN2Q9H000 416 aaKnown RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 LRRC4Q9HBW1 653 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 PLK2Q9NYY3 685 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 FEZ2Q9UHY8 353 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-212ENST00000492407 PLA2G4CQ9UP65 541 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 MAPK8IP1Q9UQF2 711 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 ZDHHC9Q9Y397 364 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
HDAC3-212ENST00000492407 SRRM3A6NNA2 597 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 MEI4A8MW99 385 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 BCAT2O15382 392 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 HYAL3O43820 417 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 CER1O95813 267 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 ATP5BP06576 529 aaKnown RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 EPHX1P07099 455 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 PAEPP09466 180 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 PPP1R2P41236 205 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 COPAP53621 1224 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 ARID5AQ03989 594 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 LRRC63Q05C16 580 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 RING1Q06587 406 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 GRIK2Q13002 908 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 CUL2Q13617 745 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 STILQ15468 1287 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 ZNF658Q5TYW1 1059 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 BSPRYQ5W0U4 402 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 FOXR2Q6PJQ5 311 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 LCLAT1Q6UWP7 414 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 SERPINA13PQ6UXR4 307 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 NAXDQ8IW45 347 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 UNC45BQ8IWX7 931 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 ELOA2Q8IYF1 753 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 AHI1Q8N157 1196 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 KDM1BQ8NB78 822 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 C1orf216Q8TAB5 229 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 SPATA20Q8TB22 786 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 TMA16Q96EY4 203 aaKnown RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 P2RY11Q96G91 374 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
HDAC3-212ENST00000492407 GPR174Q9BXC1 333 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 ULBP1Q9BZM6 244 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 CIPCQ9C0C6 399 aa9.53□□□□□ -0.88
HDAC3-212ENST00000492407 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms