RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 DRAP1Q14919 205 aaPredicted RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 EIF4HQ15056 248 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 KRT31Q15323 416 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 CSRP2Q16527 193 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 GEN1Q17RS7 908 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 FKBP15Q5T1M5 1219 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 SLC47A2Q86VL8 602 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 FAM71AQ8IYT1 594 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 C1orf131Q8NDD1 294 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 TMA16Q96EY4 203 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 ACOX2Q99424 681 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 GABRG3Q99928 467 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 DDX50Q9BQ39 737 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 IRX2Q9BZI1 471 aaPredicted RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 VPS16Q9H269 839 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 ARRDC1-AS1Q9H2J1 176 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 PDCL3Q9H2J4 239 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 SYNCQ9H7C4 482 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 HCN2Q9UL51 889 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 INVSQ9Y283 1065 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 PCDHGA5Q9Y5G8 931 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 FRYLO94915 3013 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 GFRA2O00451 464 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 NPC1O15118 1278 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 IRAK2O43187 625 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 ACSL4O60488 711 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 APOEP02649 317 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 UCHL3P15374 230 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 TGM1P22735 817 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 HOXD9P28356 352 aaPredicted RBP15.69■□□□□ 0.1
USP39-217ENST00000491659 ARID5AQ03989 594 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 STARD3Q14849 445 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 EFHC1Q5JVL4 640 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 DPY19L2P1Q6NXN4 242 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 PRR23CQ6ZRP0 262 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 OLIG1Q8TAK6 271 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 ADAM32Q8TC27 787 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 AZIN2Q96A70 460 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
USP39-217ENST00000491659 FCRL2Q96LA5 508 aaPredicted RBP15.69■□□□□ 0.1
USP39-217ENST00000491659 CPXM1Q96SM3 734 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 DUSP15Q9H1R2 295 aaPredicted RBP15.69■□□□□ 0.1
USP39-217ENST00000491659 FANCLQ9NW38 375 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 ASNSD1Q9NWL6 643 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 CACNA2D2Q9NY47 1150 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 TJP2Q9UDY2 1190 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
USP39-217ENST00000491659 MUC22E2RYF6 1773 aaPredicted RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 TBL1XO60907 577 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 HSF2BPO75031 334 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 TRUB2O95900 331 aaKnown RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 GLI1P08151 1106 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 SDHBP21912 280 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 MPLP40238 635 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 RSPO4Q2I0M5 234 aaPredicted RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 SYPL2Q5VXT5 272 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 PMS2CLQ68D20 193 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 OR6B2Q6IFH4 312 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 FAM183BPQ6ZVS7 135 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 WDTC1Q8N5D0 677 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 ZNF557Q8N988 423 aaPredicted RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 HJURPQ8NCD3 748 aaPredicted RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 WFIKKN2Q8TEU8 576 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 RMDN1Q96DB5 314 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 CIPCQ9C0C6 399 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 FAM204AQ9H8W3 233 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 PLCB1Q9NQ66 1216 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 CDV3Q9UKY7 258 aaKnown RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 CLEC4EQ9ULY5 219 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.68■□□□□ 0.1
USP39-217ENST00000491659 NUP205Q92621 2012 aa15.68■□□□□ 0.1
USP39-217ENST00000491659 CKAP5Q14008 2032 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 SPTBN4Q9H254 2564 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 CEP192Q8TEP8 1941 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 TNRC6BQ9UPQ9 1833 aaKnown RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 A0A1W2PQF6 199 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 F8VZ95 297 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 CYP11B1P15538 503 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 GABRG2P18507 467 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 BCKDHBP21953 392 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 SLC6A4P31645 630 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 P2RY2P41231 377 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 SGSHP51688 502 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 CDK17Q00537 523 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 PUM1Q14671 1186 aaKnown RBP eCLIP15.67■□□□□ 0.1
USP39-217ENST00000491659 DCAF6Q58WW2 860 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 FAM133BQ5BKY9 247 aaKnown RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 MPP7Q5T2T1 576 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 PIK3R6Q5UE93 754 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 RFWD3Q6PCD5 774 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 CCDC117Q8IWD4 279 aaPredicted RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 AHI1Q8N157 1196 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 C12orf50Q8NA57 414 aaPredicted RBP15.67■□□□□ 0.1
USP39-217ENST00000491659 TMEM35BQ8NCS4 154 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 RLN3Q8WXF3 142 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 SLC39A13Q96H72 371 aa15.67■□□□□ 0.1
USP39-217ENST00000491659 STK33Q9BYT3 514 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms