RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 KCNK16Q96T55 309 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 IMPG2Q9BZV3 1241 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 XPNPEP1Q9NQW7 623 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 DNAJC28Q9NX36 388 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 AP4B1Q9Y6B7 739 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 ZMPSTE24O75844 475 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 SRGAP2CP0DJJ0 459 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 SRGAP2BP0DMP2 458 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 MYCLP12524 364 aaPredicted RBP19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 MYL4P12829 197 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 GABRB2P47870 512 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 GHRHRQ02643 423 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 SFSWAPQ12872 951 aaKnown RBP19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 FAXCQ5TGI0 409 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 C16orf46Q6P387 395 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 TRMT10BQ6PF06 316 aaKnown RBP19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 TFAP2BQ92481 460 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 MAML3Q96JK9 1138 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 ZBTB45Q96K62 511 aaPredicted RBP19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 IFT122Q9HBG6 1241 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 PAK5Q9P286 719 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 TJP2Q9UDY2 1190 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 STYXL1Q9Y6J8 313 aa19.94■□□□□ 0.78
SNAPC3-206ENST00000490969 ARID2Q68CP9 1835 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 TTC36A6NLP5 189 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 ACAT1P24752 427 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 SLC5A2P31639 672 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 CLCN2P51788 898 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 TMED1Q13445 227 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PGM5Q15124 567 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PTPN20Q4JDL3 420 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 MAP7D3Q8IWC1 876 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 EMC1Q8N766 993 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 MCPH1Q8NEM0 835 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 CEP70Q8NHQ1 597 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 FNIP1Q8TF40 1166 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 DIS3LQ8TF46 1054 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 RMDN3Q96TC7 470 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PRPF18Q99633 342 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 RSAD1Q9HA92 442 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PNPOQ9NVS9 261 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 ARHGAP26Q9UNA1 814 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 SLC15A5A6NIM6 579 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 FAM159BA6NKW6 160 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 H7C0C1 242 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 ITGBL1O95965 494 aaPredicted RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 NCF2P19878 526 aaPredicted RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 ATP5OP48047 213 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 HDAC4P56524 1084 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 GK3PQ14409 553 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 RARS2Q5T160 578 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 DUS1LQ6P1R4 473 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 MCF2L2Q86YR7 1114 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 HOMEZQ8IX15 550 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 PHTF2Q8N3S3 785 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 TRIM56Q9BRZ2 755 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 MRPL1Q9BYD6 325 aaKnown RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 POLR3FQ9H1D9 316 aaPredicted RBP19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 CSADQ9Y600 493 aa19.93■□□□□ 0.78
SNAPC3-206ENST00000490969 H0YCG3 227 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 FBXO21O94952 628 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 KCNA4P22459 653 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 SERPINB8P50452 374 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 SERPINB9P50453 376 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 MMRN1Q13201 1228 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 APOFQ13790 326 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 SH3D19Q5HYK7 790 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 BORAQ6PGQ7 559 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 IYDQ6PHW0 289 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PPP1R14BQ96C90 147 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 FAM96AQ9H5X1 160 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PDLIM7Q9NR12 457 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 CISHQ9NSE2 258 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 GABBR1Q9UBS5 961 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 EMCNQ9ULC0 261 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PCDHGC3Q9UN70 934 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 MYOCOSA0A1B0GUC4 107 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 TRMUO75648 421 aaKnown RBP19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 DGAT1O75907 488 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 FAM163BP0C2L3 166 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 COX4I1P13073 169 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 MIPP30301 263 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 FSTL1Q12841 308 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 VWA5B1Q5TIE3 1220 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PAOXQ6QHF9 649 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 ATG14Q6ZNE5 492 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 USP50Q70EL3 339 aaPredicted RBP19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PPP4R1Q8TF05 950 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 DDI1Q8WTU0 396 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 SORT1Q99523 831 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 BTBD7Q9P203 1132 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 BLOC1S6Q9UL45 172 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 PCDHGA4Q9Y5G9 962 aa19.92■□□□□ 0.78
SNAPC3-206ENST00000490969 CNTNAP2Q9UHC6 1331 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 ASS1P00966 412 aaKnown RBP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 CST3P01034 146 aaPredicted RBP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 APRTP07741 180 aa19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 POLR2BP30876 1174 aaKnown RBP19.91■□□□□ 0.78
SNAPC3-206ENST00000490969 USP41Q3LFD5 358 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms