RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PRCCQ92733 491 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-216ENST00000490796 TMA16Q96EY4 203 aaKnown RBP20.59■□□□□ 0.89
SREBF1-216ENST00000490796 SIPA1Q96FS4 1042 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 ZNF419Q96HQ0 510 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-216ENST00000490796 PIWIL1Q96J94 861 aaKnown RBP20.59■□□□□ 0.89
SREBF1-216ENST00000490796 SFMBT1Q9UHJ3 866 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 CACNA1EQ15878 2313 aa20.59■□□□□ 0.89
SREBF1-216ENST00000490796 KMT2BQ9UMN6 2715 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-216ENST00000490796 YJEFN3A6XGL0 299 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 E7ENQ6 273 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 ARHGAP33O14559 1287 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 EPHX1P07099 455 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 OXTRP30559 389 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 RDXP35241 583 aaKnown RBP20.58■□□□□ 0.89
SREBF1-216ENST00000490796 RGS7P49802 495 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 STILQ15468 1287 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 PLEKHG6Q3KR16 790 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 LCLAT1Q6UWP7 414 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 METTL3Q86U44 580 aaKnown RBP20.58■□□□□ 0.89
SREBF1-216ENST00000490796 TMPRSS6Q8IU80 811 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 MINDY1Q8N5J2 469 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 P2RY11Q96G91 374 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 TOE1Q96GM8 510 aaKnown RBP20.58■□□□□ 0.89
SREBF1-216ENST00000490796 CAPN10Q9HC96 672 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 CD93Q9NPY3 652 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 PLA2G4CQ9UP65 541 aa20.58■□□□□ 0.89
SREBF1-216ENST00000490796 CEP192Q8TEP8 1941 aa20.58■□□□□ 0.88
SREBF1-216ENST00000490796 USP24Q9UPU5 2620 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 TNRC6BQ9UPQ9 1833 aaKnown RBP20.57■□□□□ 0.88
SREBF1-216ENST00000490796 BICDL2A1A5D9 508 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 M0QYV0 167 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 LATS1O95835 1130 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 FAM217AQ8IXS0 508 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 WFIKKN2Q8TEU8 576 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 GPR174Q9BXC1 333 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 MKRN2Q9H000 416 aaKnown RBP20.57■□□□□ 0.88
SREBF1-216ENST00000490796 ITM2CQ9NQX7 267 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 CLEC4EQ9ULY5 219 aa20.57■□□□□ 0.88
SREBF1-216ENST00000490796 NCAM1P13591 858 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 SLC11A2P49281 568 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 DAOAP59103 153 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 SIM1P81133 766 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-216ENST00000490796 SEMA3BQ13214 749 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 CNGA2Q16280 664 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 FNDC3BQ53EP0 1204 aaKnown RBP20.56■□□□□ 0.88
SREBF1-216ENST00000490796 ADGRF1Q5T601 910 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 BHLHA9Q7RTU4 235 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 CACUL1Q86Y37 369 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 UNC45BQ8IWX7 931 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 UBR7Q8N806 425 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 SORCS1Q8WY21 1168 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 IRGQQ8WZA9 623 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 MIR1-1HGQ9H1L0 117 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 WSB2Q9NYS7 404 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-216ENST00000490796 MAN1B1Q9UKM7 699 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 PCNX2A6NKB5 2137 aa20.56■□□□□ 0.88
SREBF1-216ENST00000490796 UPK3BL1B0FP48 263 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 UPK3BL2E5RIL1 263 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 PIK3R2O00459 728 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 PMM2O15305 246 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 P4HA2O15460 535 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 MSI1O43347 362 aaKnown RBP20.55■□□□□ 0.88
SREBF1-216ENST00000490796 BRD2P25440 801 aaKnown RBP20.55■□□□□ 0.88
SREBF1-216ENST00000490796 MAOBP27338 520 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 HOXD9P28356 352 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-216ENST00000490796 TPMTP51580 245 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 ENPP2Q13822 863 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 CHST9Q7L1S5 443 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 SCML4Q8N228 414 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 NELFBQ8WX92 580 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 TFAP2BQ92481 460 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 ABCB8Q9NUT2 735 aa20.55■□□□□ 0.88
SREBF1-216ENST00000490796 USP36Q9P275 1121 aaKnown RBP20.55■□□□□ 0.88
SREBF1-216ENST00000490796 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.55■□□□□ 0.88
SREBF1-216ENST00000490796 TYW5A2RUC4 315 aaKnown RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 FBXO21O94952 628 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 GNA14O95837 355 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 PROS1P07225 676 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 SPINK2P20155 84 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 PRKCHP24723 683 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 HNRNPDQ14103 355 aaKnown RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 PKDCCQ504Y2 493 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 NUGGCQ68CJ6 796 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 PMF1Q6P1K2 205 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 UNQ6494/PRO21346Q6UXR6 183 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 RRAGAQ7L523 313 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 PIP4P1Q86T03 277 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 ELOA2Q8IYF1 753 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 AHI1Q8N157 1196 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 ZNF557Q8N988 423 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 RBBP8NLQ8NC74 664 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 CADM4Q8NFZ8 388 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 SLC35F5Q8WV83 523 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 HSFY1Q96LI6 401 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 DDX50Q9BQ39 737 aaKnown RBP20.54■□□□□ 0.88
SREBF1-216ENST00000490796 MIS12Q9H081 205 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 GGA2Q9UJY4 613 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 STOML2Q9UJZ1 356 aa20.54■□□□□ 0.88
SREBF1-216ENST00000490796 CTNND2Q9UQB3 1225 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms