RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NUGGCQ68CJ6 796 aa32.67■■■□□ 2.82
LDB1-204ENST00000490751 DQX1Q8TE96 717 aaKnown RBP32.67■■■□□ 2.82
LDB1-204ENST00000490751 CALCOCO1Q9P1Z2 691 aa32.67■■■□□ 2.82
LDB1-204ENST00000490751 WASH3PC4AMC7 463 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 RING1Q06587 406 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 MIIPQ5JXC2 388 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 UNC45BQ8IWX7 931 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 UCMAQ8WVF2 138 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 TMA16Q96EY4 203 aaKnown RBP32.66■■■□□ 2.82
LDB1-204ENST00000490751 MBD1Q9UIS9 605 aaPredicted RBP32.66■■■□□ 2.82
LDB1-204ENST00000490751 DNAJC12Q9UKB3 198 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 NAALADL1Q9UQQ1 740 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 STON1Q9Y6Q2 735 aa32.66■■■□□ 2.82
LDB1-204ENST00000490751 SLC30A4O14863 429 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 ZBTB24O43167 697 aaPredicted RBP32.65■■■□□ 2.82
LDB1-204ENST00000490751 PAPSS1O43252 624 aaPredicted RBP32.65■■■□□ 2.82
LDB1-204ENST00000490751 MAP3K13O43283 966 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 CAVIN2O95810 425 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 DHPSP49366 369 aaPredicted RBP32.65■■■□□ 2.82
LDB1-204ENST00000490751 PDCLQ13371 301 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 TMEM110Q86TL2 294 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 SERPINB11Q96P15 392 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 GBP4Q96PP9 640 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 RXFP3Q9NSD7 469 aa32.65■■■□□ 2.82
LDB1-204ENST00000490751 SAMSN1Q9NSI8 373 aaKnown RBP32.65■■■□□ 2.82
LDB1-204ENST00000490751 NDUFV2P19404 249 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 SLC11A2P49281 568 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 EIF4HQ15056 248 aaKnown RBP32.64■■■□□ 2.82
LDB1-204ENST00000490751 CT47A1Q5JQC4 288 aaPredicted RBP32.64■■■□□ 2.82
LDB1-204ENST00000490751 TCEAL6Q6IPX3 200 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 LPCAT2Q7L5N7 544 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 TCEAL3Q969E4 200 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 CIPCQ9C0C6 399 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 ELOVL2Q9NXB9 296 aa32.64■■■□□ 2.82
LDB1-204ENST00000490751 THAP10Q9P2Z0 257 aaPredicted RBP32.64■■■□□ 2.82
LDB1-204ENST00000490751 TNRC6BQ9UPQ9 1833 aaKnown RBP32.63■■■□□ 2.81
LDB1-204ENST00000490751 DCDC2BA2VCK2 349 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 KCNJ18B7U540 433 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 ACSL4O60488 711 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 IL12RB1P42701 662 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 SGSHP51688 502 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 PTK2Q05397 1052 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 KCNJ12Q14500 433 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 RFWD3Q6PCD5 774 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 BEND5Q7L4P6 421 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 CYP2U1Q7Z449 544 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 PASD1Q8IV76 773 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 ADAM32Q8TC27 787 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 GPT2Q8TD30 523 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 FCRL2Q96LA5 508 aaPredicted RBP32.63■■■□□ 2.81
LDB1-204ENST00000490751 TRIM62Q9BVG3 475 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 TJP2Q9UDY2 1190 aa32.63■■■□□ 2.81
LDB1-204ENST00000490751 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 GOLGA6L7A0A1B0GV03 622 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 MED19A0JLT2 244 aaPredicted RBP32.62■■■□□ 2.81
LDB1-204ENST00000490751 PES1O00541 588 aaKnown RBP32.62■■■□□ 2.81
LDB1-204ENST00000490751 CAPN9O14815 690 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 NPC1O15118 1278 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 PNMA6AP0CW24 399 aaPredicted RBP32.62■■■□□ 2.81
LDB1-204ENST00000490751 NNTQ13423 1086 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 FAM133BQ5BKY9 247 aaKnown RBP32.62■■■□□ 2.81
LDB1-204ENST00000490751 SYPL2Q5VXT5 272 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 TMEM215Q68D42 235 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 SMYD5Q6GMV2 418 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 TAC4Q86UU9 113 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 TMEFF1Q8IYR6 380 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 PCDHGC3Q9UN70 934 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 TLR6Q9Y2C9 796 aa32.62■■■□□ 2.81
LDB1-204ENST00000490751 CEP192Q8TEP8 1941 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 FOXN3O00409 490 aaPredicted RBP32.61■■■□□ 2.81
LDB1-204ENST00000490751 HLA-FP30511 346 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 SLC6A4P31645 630 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 ZNF234Q14588 700 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 STARD3Q14849 445 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 PIK3R6Q5UE93 754 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 DPY19L2P1Q6NXN4 242 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 ARMCX6Q7L4S7 300 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 WDTC1Q8N5D0 677 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 SORCS1Q8WY21 1168 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 AZIN2Q96A70 460 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 SLC6A17Q9H1V8 727 aa32.61■■■□□ 2.81
LDB1-204ENST00000490751 ENPP2Q13822 863 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 E2F5Q15329 346 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 NADSYN1Q6IA69 706 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 SLC39A13Q96H72 371 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 MRGPRX1Q96LB2 322 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 CPXM1Q96SM3 734 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 IRX2Q9BZI1 471 aaPredicted RBP32.6■■■□□ 2.81
LDB1-204ENST00000490751 POPDC2Q9HBU9 364 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 NFE2L3Q9Y4A8 694 aa32.6■■■□□ 2.81
LDB1-204ENST00000490751 IRAK2O43187 625 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 TBL1XO60907 577 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 CLCN1P35523 988 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 PTGER3P43115 390 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 LIMK1P53667 647 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 YWHAZP63104 245 aaKnown RBP32.59■■■□□ 2.81
LDB1-204ENST00000490751 ARID5AQ03989 594 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 KCNMA1Q12791 1236 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 TCP11X2Q5H9J9 407 aa32.59■■■□□ 2.81
LDB1-204ENST00000490751 SLC47A2Q86VL8 602 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms