RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TRIM66O15016 1216 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 LAMTOR5O43504 91 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 GPD2P43304 727 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 PDCLQ13371 301 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 PPP1R15BQ5SWA1 713 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 SEL1L2Q5TEA6 688 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 TXNDC11Q6PKC3 985 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 C12orf29Q8N999 325 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 C18orf8Q96DM3 657 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 C8orf48Q96LL4 319 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 CEP295NLQ96MC4 621 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 FAM83CQ9BQN1 747 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
PCCB-218ENST00000490504 C8orf33Q9H7E9 229 aaPredicted RBP16.34■□□□□ 0.21
PCCB-218ENST00000490504 PRR23AA6NEV1 266 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 SPECC1L-ADORA2AF8WAN1 911 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 CCDC188H7C350 402 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 KRIT1O00522 736 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 FGGP02679 453 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 GABRB2P47870 512 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 RWDD2BP57060 319 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 MTAPQ13126 283 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 ZNF211Q13398 564 aaPredicted RBP16.33■□□□□ 0.2
PCCB-218ENST00000490504 ZNF268Q14587 947 aaPredicted RBP16.33■□□□□ 0.2
PCCB-218ENST00000490504 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 TRIM68Q6AZZ1 485 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 C8orf74Q6P047 294 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 DCUN1D2Q6PH85 259 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 TMCO3Q6UWJ1 677 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 ARL14EPQ8N8R7 260 aaPredicted RBP16.33■□□□□ 0.2
PCCB-218ENST00000490504 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
PCCB-218ENST00000490504 MCEEQ96PE7 176 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 CPXM1Q96SM3 734 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 TTLL2Q9BWV7 592 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 MIS12Q9H081 205 aa16.33■□□□□ 0.2
PCCB-218ENST00000490504 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCCB-218ENST00000490504 TRAV19A0A0A6YYK7 116 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 PSTPIP1O43586 416 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 ERLIN1O75477 346 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 GJB6O95452 261 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 ERBB2P04626 1255 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 SETSIPP0DME0 302 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 CHRNB1P11230 501 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 CTHP32929 405 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 RPL7AP62424 266 aaKnown RBP16.32■□□□□ 0.2
PCCB-218ENST00000490504 VSNL1P62760 191 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 CSTF1Q05048 431 aaKnown RBP16.32■□□□□ 0.2
PCCB-218ENST00000490504 LONRF2Q1L5Z9 754 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
PCCB-218ENST00000490504 RALGPS2Q86X27 583 aaPredicted RBP16.32■□□□□ 0.2
PCCB-218ENST00000490504 XYLT1Q86Y38 959 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 CRYBG2Q8N1P7 616 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 UBA3Q8TBC4 463 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
PCCB-218ENST00000490504 KCNK16Q96T55 309 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 LRRC1Q9BTT6 524 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 KIF9Q9HAQ2 790 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 HPS4Q9NQG7 708 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 HESX1Q9UBX0 185 aa16.32■□□□□ 0.2
PCCB-218ENST00000490504 OTOL1A6NHN0 477 aaPredicted RBP16.31■□□□□ 0.2
PCCB-218ENST00000490504 SIGLEC16A6NMB1 481 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 CKMP06732 381 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 USP17L7P0C7H9 530 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 ITPRIPL2Q3MIP1 535 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 FAM35AQ86V20 835 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 HNRNPLLQ8WVV9 542 aaKnown RBP16.31■□□□□ 0.2
PCCB-218ENST00000490504 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 KRT12Q99456 494 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 AP1M1Q9BXS5 423 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 FAM49BQ9NUQ9 324 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 FBXO4Q9UKT5 387 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 COL4A2P08572 1712 aa16.31■□□□□ 0.2
PCCB-218ENST00000490504 GOLGA6L10A0A0M3HER8 536 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 ZNF840PA6NDX5 716 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 GOLGA8SH3BPF8 625 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 ARSAP15289 507 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 HDCP19113 662 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 TAF10Q12962 218 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 PIGHQ14442 188 aaPredicted RBP16.3■□□□□ 0.2
PCCB-218ENST00000490504 ZNF77Q15935 545 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 PPP2R5EQ16537 467 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
PCCB-218ENST00000490504 TSSK4Q6SA08 328 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 FUKQ8N0W3 1084 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 NIPA2Q8N8Q9 360 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 ARFGAP3Q9NP61 516 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 STIM2Q9P246 746 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 TJP2Q9UDY2 1190 aa16.3■□□□□ 0.2
PCCB-218ENST00000490504 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms