RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GRK6P43250 576 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 GRIA4P48058 902 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 CCT8P50990 548 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 CAMK2GQ13555 558 aaPredicted RBP14.63□□□□□ -0.07
VARS-227ENST00000489979 CUL4BQ13620 913 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 SHC4Q6S5L8 630 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 SV2AQ7L0J3 742 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 CPXM2Q8N436 756 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 IGSF8Q969P0 613 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 SLC2A11Q9BYW1 496 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 ZSCAN16Q9H4T2 348 aaPredicted RBP14.63□□□□□ -0.07
VARS-227ENST00000489979 MAGEF1Q9HAY2 307 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 OSGEPQ9NPF4 335 aa14.63□□□□□ -0.07
VARS-227ENST00000489979 TP53BP1Q12888 1972 aaPredicted RBP14.63□□□□□ -0.07
VARS-227ENST00000489979 PVALEFA0A1B0GWK0 134 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 SLC12A8A0AV02 714 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 H0Y8X5 98 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 PCDHGA12O60330 932 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 SEMA4FO95754 770 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 PRB1P04280 392 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 AFMP43652 599 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 ABCG1P45844 678 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 IL9RQ01113 521 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 FNDC3BQ53EP0 1204 aaKnown RBP14.62□□□□□ -0.07
VARS-227ENST00000489979 KCNT1Q5JUK3 1230 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 ZNF366Q8N895 744 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 ENGASEQ8NFI3 743 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 PIP4K2CQ8TBX8 421 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 CYB5D2Q8WUJ1 264 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 BIRC7Q96CA5 298 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 UBL7Q96S82 380 aaPredicted RBP14.62□□□□□ -0.07
VARS-227ENST00000489979 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 BTBD1Q9H0C5 482 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 APOBEC3GQ9HC16 384 aaKnown RBP14.62□□□□□ -0.07
VARS-227ENST00000489979 MARCH2Q9P0N8 246 aa14.62□□□□□ -0.07
VARS-227ENST00000489979 PLK4O00444 970 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 TSPAN3O60637 253 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 CUTAO60888 179 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 FSBPO95073 299 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 CD58P19256 250 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 CTSKP43235 329 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 C1orf220Q5T0J3 134 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
VARS-227ENST00000489979 RSRC2Q7L4I2 434 aaKnown RBP14.61□□□□□ -0.07
VARS-227ENST00000489979 FAM217AQ8IXS0 508 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 TMC2Q8TDI7 906 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 COL26A1Q96A83 441 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 BACH2Q9BYV9 841 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 TMEM245Q9H330 911 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 CYP3A43Q9HB55 503 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 FTSJ1Q9UET6 329 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 STRIP2Q9ULQ0 834 aa14.61□□□□□ -0.07
VARS-227ENST00000489979 MUC22E2RYF6 1773 aaPredicted RBP14.6□□□□□ -0.07
VARS-227ENST00000489979 E9PAM4 449 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 IKBKBO14920 756 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 NR3C1P04150 777 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 CD27P26842 260 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 HOXD9P28356 352 aaPredicted RBP14.6□□□□□ -0.07
VARS-227ENST00000489979 HLA-FP30511 346 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 RPS14P62263 151 aaKnown RBP14.6□□□□□ -0.07
VARS-227ENST00000489979 C19orf57Q0VDD7 668 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 STK4Q13043 487 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 ADAT2Q7Z6V5 191 aaKnown RBP14.6□□□□□ -0.07
VARS-227ENST00000489979 TMPRSS12Q86WS5 348 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 GRAMD1CQ8IYS0 662 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 ARHGAP18Q8N392 663 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 KIAA0895Q8NCT3 520 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 TMEM174Q8WUU8 243 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 ARID3AQ99856 593 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 ORAI3Q9BRQ5 295 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 IMPG2Q9BZV3 1241 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 PLA2G4CQ9UP65 541 aa14.6□□□□□ -0.07
VARS-227ENST00000489979 PLXNA2O75051 1894 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 KLRC4O43908 158 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 DNTTP04053 509 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 C7P10643 843 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 ITPKBP27987 946 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 BCAT1P54687 386 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 CLDN6P56747 220 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 YWHAGP61981 247 aaKnown RBP eCLIP14.59□□□□□ -0.07
VARS-227ENST00000489979 INAVAQ3KP66 663 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 MPPE1Q53F39 396 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 ZNF394Q53GI3 561 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 CHST9Q7L1S5 443 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 WFIKKN2Q8TEU8 576 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 PLD4Q96BZ4 506 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
VARS-227ENST00000489979 KCTD10Q9H3F6 313 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 SGK2Q9HBY8 427 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 PRSS16Q9NQE7 514 aa14.59□□□□□ -0.07
VARS-227ENST00000489979 PTPRQQ9UMZ3 2332 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 PAPSS1O43252 624 aaPredicted RBP14.58□□□□□ -0.08
VARS-227ENST00000489979 C1QL1O75973 258 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 YEATS4O95619 227 aa14.58□□□□□ -0.08
VARS-227ENST00000489979 JUPP14923 745 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms