RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GABRG2P18507 467 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 GBP1P32455 592 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 P2RY2P41231 377 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 ELF2Q15723 593 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 FAM133BQ5BKY9 247 aaKnown RBP26.01■■□□□ 1.75
HMGN1-217ENST00000489072 KLHDC7AQ5VTJ3 777 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 NUGGCQ68CJ6 796 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 KIAA1211LQ6NV74 962 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 PRR23CQ6ZRP0 262 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 BEND5Q7L4P6 421 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 TAC4Q86UU9 113 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 UNC45BQ8IWX7 931 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 FRMD1Q8N878 549 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 LSM14BQ9BX40 385 aaKnown RBP26.01■■□□□ 1.75
HMGN1-217ENST00000489072 SLC2A11Q9BYW1 496 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 DLL3Q9NYJ7 618 aa26.01■■□□□ 1.75
HMGN1-217ENST00000489072 WASH3PC4AMC7 463 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 RHOBTB1O94844 696 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 SLC6A4P31645 630 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 RAPGEF1Q13905 1077 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 DRAP1Q14919 205 aaPredicted RBP26■■□□□ 1.75
HMGN1-217ENST00000489072 TAF5Q15542 800 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 PMS2CLQ68D20 193 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 NADSYN1Q6IA69 706 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 RFWD3Q6PCD5 774 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 ANKS1BQ7Z6G8 1248 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 C1orf131Q8NDD1 294 aaKnown RBP26■■□□□ 1.75
HMGN1-217ENST00000489072 TMA16Q96EY4 203 aaKnown RBP26■■□□□ 1.75
HMGN1-217ENST00000489072 SLC39A13Q96H72 371 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 SERPINB11Q96P15 392 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 NAA15Q9BXJ9 866 aaKnown RBP26■■□□□ 1.75
HMGN1-217ENST00000489072 LHX5Q9H2C1 402 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 RAD54BQ9Y620 910 aa26■■□□□ 1.75
HMGN1-217ENST00000489072 PRR5-ARHGAP8B1AHC4 643 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 ACSL4O60488 711 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 ZNF445P59923 1031 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PITX1P78337 314 aaPredicted RBP25.99■■□□□ 1.75
HMGN1-217ENST00000489072 ARHGAP8P85298 464 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 NNTQ13423 1086 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 KRT31Q15323 416 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 MAP7D1Q3KQU3 841 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PLA2G2CQ5R387 149 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 TMEM215Q68D42 235 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 SDE2Q6IQ49 451 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PGBD3Q8N328 593 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 IPO4Q8TEX9 1081 aaKnown RBP25.99■■□□□ 1.75
HMGN1-217ENST00000489072 AZIN2Q96A70 460 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PPP1R13BQ96KQ4 1090 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 SMOC1Q9H4F8 434 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 POPDC2Q9HBU9 364 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PLCB1Q9NQ66 1216 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 THAP10Q9P2Z0 257 aaPredicted RBP25.99■■□□□ 1.75
HMGN1-217ENST00000489072 MBD1Q9UIS9 605 aaPredicted RBP25.99■■□□□ 1.75
HMGN1-217ENST00000489072 TLR6Q9Y2C9 796 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 PCDHGA5Q9Y5G8 931 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 STON1Q9Y6Q2 735 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 SPTBN2O15020 2390 aa25.99■■□□□ 1.75
HMGN1-217ENST00000489072 CAPN9O14815 690 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 MPLP40238 635 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 SLC11A2P49281 568 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 YWHAZP63104 245 aaKnown RBP25.98■■□□□ 1.75
HMGN1-217ENST00000489072 SF3A2Q15428 464 aaKnown RBP25.98■■□□□ 1.75
HMGN1-217ENST00000489072 PIK3R6Q5UE93 754 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 RNF43Q68DV7 783 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 SASS6Q6UVJ0 657 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 C11orf74Q86VG3 221 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 MYEOVQ96EZ4 313 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 TRIM62Q9BVG3 475 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 VPS16Q9H269 839 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 FANCLQ9NW38 375 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 ELOVL2Q9NXB9 296 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 CKAP5Q14008 2032 aa25.98■■□□□ 1.75
HMGN1-217ENST00000489072 TNRC6BQ9UPQ9 1833 aaKnown RBP25.98■■□□□ 1.75
HMGN1-217ENST00000489072 CEP192Q8TEP8 1941 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 GDF9O60383 454 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 MBD3O95983 291 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 IGLV3-25P01717 112 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 ZNF806P0C7X5 589 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 UCHL3P15374 230 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 NDUFV2P19404 249 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 HLA-FP30511 346 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 KRT9P35527 623 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 IL12RB1P42701 662 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 ENPP2Q13822 863 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 PUM1Q14671 1186 aaKnown RBP eCLIP25.97■■□□□ 1.753e-25■□□□□ 8.5
HMGN1-217ENST00000489072 WFDC5Q8TCV5 224 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 SORCS1Q8WY21 1168 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 ANO10Q9NW15 660 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 CALCOCO1Q9P1Z2 691 aa25.97■■□□□ 1.75
HMGN1-217ENST00000489072 IRAK2O43187 625 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 TRUB2O95900 331 aaKnown RBP25.96■■□□□ 1.75
HMGN1-217ENST00000489072 ERBB2P04626 1255 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 KLK7P49862 253 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 CREB5Q02930 508 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 STX1AQ16623 288 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 PTPN20Q4JDL3 420 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 CCDC183Q5T5S1 534 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 FAM183BPQ6ZVS7 135 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 UCMAQ8WVF2 138 aa25.96■■□□□ 1.75
HMGN1-217ENST00000489072 SPACA7Q96KW9 195 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms