RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DDX1Q92499 740 aaKnown RBP12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC2A11Q9BYW1 496 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 CD93Q9NPY3 652 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 STOML2Q9UJZ1 356 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 ABCA7Q8IZY2 2146 aa12.44□□□□□ -0.42
CCHCR1-215ENST00000488920 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 IGHV1OR15-9A0A0B4J2B8 117 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 AP5Z1O43299 807 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 THAP12O43422 761 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 MED7O43513 233 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 TIMM44O43615 452 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 SYNCRIPO60506 623 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF217O75362 1048 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 IGLV3-27P01718 113 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 NCAM1P13591 858 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC11A2P49281 568 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 SGSHP51688 502 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 TBX4P57082 545 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF234Q14588 700 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 STARD3Q14849 445 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 ARHGAP44Q17R89 818 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 TRIM61Q5EBN2 209 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 SPDYCQ5MJ68 293 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 RFWD3Q6PCD5 774 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 TRIM65Q6PJ69 517 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 GBP6Q6ZN66 633 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF606Q8WXB4 792 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 LSM14BQ9BX40 385 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 CLSTN2Q9H4D0 955 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 PILRBQ9UKJ0 227 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
CCHCR1-215ENST00000488920 SPTBN2O15020 2390 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 BECN2A8MW95 431 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 CDX4O14627 284 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 NPC1O15118 1278 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ACSL4O60488 711 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 LATS1O95835 1130 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ADRB1P08588 477 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 PRKCHP24723 683 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 HLA-FP30511 346 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 GNA15P30679 374 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC6A4P31645 630 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ACADSBP45954 432 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 MTIF2P46199 727 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 RPL34P49207 117 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ARID5AQ03989 594 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF33AQ06730 810 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ENPP2Q13822 863 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 EIF4HQ15056 248 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 TPD52L1Q16890 204 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 EXOC3L4Q17RC7 722 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 N4BP2L1Q5TBK1 243 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 PIK3R6Q5UE93 754 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 DQX1Q8TE96 717 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 STK32AQ8WU08 396 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 CYB5D2Q8WUJ1 264 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 FAM149B1Q96BN6 582 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 MKRN2Q9H000 416 aaKnown RBP12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 PRDM16Q9HAZ2 1276 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 TMEM9BQ9NQ34 198 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 ABCB8Q9NUT2 735 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 STIM2Q9P246 746 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 RALGAPA1Q6GYQ0 2036 aa12.42□□□□□ -0.42
CCHCR1-215ENST00000488920 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 E5RJQ4 531 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 PAPSS1O43252 624 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 TBL1XO60907 577 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 NDUFS2O75306 463 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 KCNK5O95279 499 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 CFIP05156 583 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 EPHX1P07099 455 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 PON1P27169 355 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 MAPK8P45983 427 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 ZNF445P59923 1031 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 RING1Q06587 406 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 UAP1L1Q3KQV9 507 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 SYPL2Q5VXT5 272 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 NADSYN1Q6IA69 706 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 SERPINA13PQ6UXR4 307 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 CHST9Q7L1S5 443 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 TMEM110Q86TL2 294 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 ADIPOR2Q86V24 386 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 SLC41A1Q8IVJ1 513 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 MYEOVQ96EZ4 313 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 FCRL2Q96LA5 508 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 HSPA12BQ96MM6 686 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 NUSAP1Q9BXS6 441 aaKnown RBP12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 ITM2CQ9NQX7 267 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
CCHCR1-215ENST00000488920 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms