RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 EXTL3O43909 919 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ATP2C2O75185 946 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF205O95201 554 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 IL18RAPO95256 599 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 GJB6O95452 261 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM191BP0C7N4 346 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 DLATP10515 647 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PFKFB1P16118 471 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 LMO2P25791 158 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 RPL10P27635 214 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 GABRR2P28476 465 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 GDI1P31150 447 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 HOXC13P31276 330 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PCBP3P57721 371 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PSMC1P62191 440 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 STK4Q13043 487 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PPP2R5DQ14738 602 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 UBXN2BQ14CS0 331 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 POSTNQ15063 836 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ANGPT1Q15389 498 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 MLF2Q15773 248 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 SV2CQ496J9 727 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 SLC44A4Q53GD3 710 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 CYP4A22Q5TCH4 519 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 IQCEQ6IPM2 695 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 TPRG1Q6ZUI0 275 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 UNC13DQ70J99 1090 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 MTSS1LQ765P7 747 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 EPM2AIP1Q7L775 607 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 FRMD5Q7Z6J6 570 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 DNAJB7Q7Z6W7 309 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 METTL23Q86XA0 190 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 CCDC105Q8IYK2 499 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ELMOD1Q8N336 334 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PDCL2Q8N4E4 241 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 KIAA0895Q8NCT3 520 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ZSCAN18Q8TBC5 510 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PLEKHO2Q8TD55 490 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 KCNG4Q8TDN1 519 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 LEO1Q8WVC0 666 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 CCDC127Q96BQ5 260 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PAGE5Q96GU1 130 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 LRRC3BQ96PB8 259 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 C7orf25Q9BPX7 421 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 MCMBPQ9BTE3 642 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 GOLPH3LQ9H4A5 285 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM206Q9H813 350 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 ASAH2Q9NR71 780 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 SLC2A4RGQ9NR83 387 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 AGPAT3Q9NRZ7 376 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 DDX43Q9NXZ2 648 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 CGGBP1Q9UFW8 167 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 RCOR1Q9UKL0 485 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 NDRG2Q9UN36 371 aaKnown RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 MAGED2Q9UNF1 606 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-213ENST00000488386 DERAQ9Y315 318 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 NME7Q9Y5B8 376 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 R4GN57 208 aa6.33□□□□□ -1.4
CDHR3-213ENST00000488386 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF638Q14966 1978 aaKnown RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 MYBPHLA2RUH7 354 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 HEPACAM2A8MVW5 462 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 CLSTN1O94985 981 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 PRAMEF12O95522 483 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 LDHAP00338 332 aaKnown RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 GSNP06396 782 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 POU2F2P09086 479 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 PDGFRBP09619 1106 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 HAPLN1P10915 354 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 VAV1P15498 845 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 CYP2F1P24903 491 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 TRHRP34981 398 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 GDNFP39905 211 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 CLCN5P51795 746 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 EPHB3P54753 998 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 MYBPC2Q14324 1141 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 NCAPHQ15003 741 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 DDR2Q16832 855 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 TSSK4Q6SA08 328 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 THEM5Q8N1Q8 247 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 PJA1Q8NG27 643 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 SMARCD2Q92925 531 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ELSPBP1Q96BH3 223 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ANKRD36BP1Q96IX9 119 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF560Q96MR9 790 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 MRPL45Q9BRJ2 306 aaKnown RBP6.32□□□□□ -1.4
CDHR3-213ENST00000488386 SLC12A9Q9BXP2 914 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 KCNH6Q9H252 994 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 DPEP3Q9H4B8 488 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 BRD9Q9H8M2 597 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 ZFP14Q9HCL3 533 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 INTS13Q9NVM9 706 aa6.32□□□□□ -1.4
CDHR3-213ENST00000488386 DLGAP2Q9P1A6 1054 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms