RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZC3H18Q86VM9 953 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 RSAD2Q8WXG1 361 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 ZIM3Q96PE6 472 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 YME1L1Q96TA2 773 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 SH3GL2Q99962 352 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 TTLL2Q9BWV7 592 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 MED4Q9NPJ6 270 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 CLIC5Q9NZA1 410 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 DTLQ9NZJ0 730 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.84
SF3B1-211ENST00000487698 ANAPC5Q9UJX4 755 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 NEU3Q9UQ49 428 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 NUP205Q92621 2012 aa9.77□□□□□ -0.84
SF3B1-211ENST00000487698 CFAP69A5D8W1 941 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 H0YGN5 161 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 MSI1O43347 362 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 CREB3O43889 395 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 IFNB1P01574 187 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 ZDHHC11BP0C7U3 371 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 RPL22P35268 128 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 CHKAP35790 457 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 PPM1AP35813 382 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 GGCXP38435 758 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 PSEN1P49768 467 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 GPS1Q13098 491 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 PPP2R5DQ14738 602 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 ARTNQ5T4W7 220 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 CFAP58Q5T655 872 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 RNASEH2BQ5TBB1 312 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 TPGS2Q68CL5 300 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 KIAA1841Q6NSI8 718 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 DARS2Q6PI48 645 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 FAM71DQ8N9W8 422 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 ZNF461Q8TAF7 563 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 BADQ92934 168 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 FBXO32Q969P5 355 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 SERPINB11Q96P15 392 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 QKIQ96PU8 341 aaKnown RBP eCLIP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 OSBPL2Q9H1P3 480 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 TMEM51Q9NW97 253 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 SFMBT1Q9UHJ3 866 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 ATP8A1Q9Y2Q0 1164 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
SF3B1-211ENST00000487698 NFS1Q9Y697 457 aa9.77□□□□□ -0.85
SF3B1-211ENST00000487698 SHROOM3Q8TF72 1996 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SLC38A8A6NNN8 435 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 KCNU1A8MYU2 1149 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 H7C0C1 242 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 C2CD2LO14523 706 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MFSD11O43934 449 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SEC24AO95486 1093 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 FGBP02675 491 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 RARGP13631 454 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 ATP5OP48047 213 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PMS2P54278 862 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TAF10Q12962 218 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 GPS2Q13227 327 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SLMAPQ14BN4 828 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SLC45A4Q5BKX6 768 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 LRIG3Q6UXM1 1119 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 CDKL3Q8IVW4 592 aaPredicted RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 GPR65Q8IYL9 337 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 ZCCHC9Q8N567 271 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SLC39A13Q96H72 371 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TSPYL1Q9H0U9 437 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PABPC3Q9H361 631 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PRDM10Q9NQV6 1147 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TLR8Q9NR97 1041 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 OR12D3Q9UGF7 316 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 NUDT5Q9UKK9 219 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 SHOC2Q9UQ13 582 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 DENND4CQ5VZ89 1909 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MYO18AQ92614 2054 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 ZBBXA8MT70 800 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 NDC80O14777 642 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 LRIG2O94898 1065 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MAP3K6O95382 1288 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 URODP06132 367 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 RBL1P28749 1068 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 OAS2P29728 719 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 HOXC13P31276 330 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 CCR1P32246 355 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TUFMP49411 452 aaKnown RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 NRLP54845 237 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TPI1P60174 286 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 RAB33AQ14088 237 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 TMEM240Q5SV17 173 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 MANEALQ5VSG8 457 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 B4GALNT4Q76KP1 1039 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 RELL1Q8IUW5 271 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 UBLCP1Q8WVY7 318 aaPredicted RBP9.76□□□□□ -0.85
SF3B1-211ENST00000487698 CPT1BQ92523 772 aa9.76□□□□□ -0.85
SF3B1-211ENST00000487698 PRCCQ92733 491 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms