RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 DGAT2L7PQ6IED9 249 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 KIRREL2Q6UWL6 708 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 SYNE3Q6ZMZ3 975 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 RINLQ6ZS11 566 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 ESX1Q8N693 406 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 PNPLA1Q8N8W4 532 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FAM71DQ8N9W8 422 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FAR2Q96K12 515 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 PPM1MQ96MI6 270 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FSD1LQ9BXM9 530 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 SNX15Q9NRS6 342 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 BAG5Q9UL15 447 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 PCDHA10Q9Y5I2 948 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 ADCY10Q96PN6 1610 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 NUP160Q12769 1436 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3DA0A087WVF3 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3IA0A087WXS9 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3EA0A087X179 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3KA0A087X1G2 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3BA6NDS4 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3FA6NER0 549 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 AGAP5A6NIR3 686 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3LB9A6J9 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 NPIPB8E9PQR5 432 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 STX16-NPEPL1H3BU86 382 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 QSOX1O00391 747 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 STX16O14662 325 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 HOXC11O43248 304 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 PRAMEF2O60811 474 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 NPSP0C0P6 89 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3HP0C7X1 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 MYCLP12524 364 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TUBP50607 506 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 CCR5P51681 352 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 EEFSECP57772 596 aaKnown RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 RPL15P61313 204 aaKnown RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 RBM6P78332 1123 aaKnown RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TLE2Q04725 743 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 CCDC15Q0P6D6 951 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 LMAN2Q12907 356 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBRG1Q3YBR2 411 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 LRRC24Q50LG9 513 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 RNASE12Q5GAN4 147 aaKnown RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3GQ6DHY5 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3CQ6IPX1 549 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 ANKRD16Q6P6B7 361 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 MTHFD1LQ6UB35 978 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D3Q8IZP1 549 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 TWNKQ96RR1 684 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 THAP7Q9BT49 309 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 CINPQ9BW66 212 aaPredicted RBP5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 RMI1Q9H9A7 625 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 PLEKHA2Q9HB19 425 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 NOD2Q9HC29 1040 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 WASH6PQ9NQA3 447 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 ADAMTS5Q9UNA0 930 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 DNAJC16Q9Y2G8 782 aa5.59□□□□□ -1.51
PRPF38A-203ENST00000487160 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.52
PRPF38A-203ENST00000487160 ABCA10Q8WWZ4 1543 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 CCDC151A5D8V7 595 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 J3KRW8 73 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 EPB41L2O43491 1005 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 HEXIM1O94992 359 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 MBPP02686 304 aaPredicted RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 XBP1P17861 261 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 GALNSP34059 522 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 PLA2G5P39877 138 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 MCM2P49736 904 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 CCT8P50990 548 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 GPC5P78333 572 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 RAE1P78406 368 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 TAP1Q03518 808 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 TRPC3Q13507 836 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 CBFBQ13951 182 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 PCID2Q5JVF3 399 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 DENND2CQ68D51 928 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 LAIR1Q6GTX8 287 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 RASGRP2Q7LDG7 609 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 SFTPA1Q8IWL2 248 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 C12orf76Q8N812 135 aaPredicted RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 BEND2Q8NDZ0 799 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 KTI12Q96EK9 354 aaPredicted RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 EDC3Q96F86 508 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 TRMT61AQ96FX7 289 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 SEC62Q99442 399 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF747Q9BV97 191 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 RASSF1Q9NS23 344 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 TMEM160Q9NX00 188 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 FOXJ2Q9P0K8 574 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 SLC13A4Q9UKG4 626 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 RCE1Q9Y256 329 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 ADGRL1O94910 1474 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 LMTK3Q96Q04 1460 aa5.58□□□□□ -1.52
PRPF38A-203ENST00000487160 GRID2IPA4D2P6 1211 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 ZNF202O95125 648 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CYP3A4P08684 503 aa5.57□□□□□ -1.52
PRPF38A-203ENST00000487160 CNPP09543 421 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms