RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SERPINB6P35237 376 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CHKAP35790 457 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 MAGEA4P43358 317 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CTCFP49711 727 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 VPS41P49754 854 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 GDF10P55107 478 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ARL4CP56559 192 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 SKOR1P84550 965 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CDK16Q00536 496 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 IFFO1Q0D2I5 559 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 SLC29A2Q14542 456 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 STAT4Q14765 748 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 RASA2Q15283 850 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 TERF2Q15554 542 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 LRRC26Q2I0M4 334 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 RTP2Q5QGT7 225 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 C1orf228Q6PIY5 440 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CEP57Q86XR8 500 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 SCN4BQ8IWT1 228 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 LZTR1Q8N653 840 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 MCUQ8NE86 351 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 RIN2Q8WYP3 895 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ARL8AQ96BM9 186 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 SERPINB12Q96P63 405 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CDK5RAP1Q96SZ6 601 aaKnown RBP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 RBM15Q96T37 977 aaKnown RBP eCLIP12.03□□□□□ -0.48
PRKCB-207ENST00000486868 CCDC77Q9BR77 488 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 RETREG1Q9H6L5 497 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 VPS18Q9P253 973 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 ADAM21Q9UKJ8 722 aa12.03□□□□□ -0.48
PRKCB-207ENST00000486868 WASH4PA8MWX3 477 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 KCNU1A8MYU2 1149 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 POLR3GO15318 223 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 OPHN1O60890 802 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 IVLP07476 585 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 ZDHHC11BP0C7U3 371 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 ETS1P14921 441 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 CPB1P15086 417 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TPSB2P20231 275 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 RBL1P28749 1068 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 FDFT1P37268 417 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 KPNA1P52294 538 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TPI1P60174 286 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 DSG1Q02413 1049 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 GBE1Q04446 702 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 SLC10A2Q12908 348 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 KCNJ11Q14654 390 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 PRKD1Q15139 912 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TPSAB1Q15661 275 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TTMPQ5BVD1 217 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TNFAIP8L3Q5GJ75 292 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 SNX30Q5VWJ9 437 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 KCNT2Q6UVM3 1135 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 CNPY4Q8N129 248 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 SLC39A11Q8N1S5 342 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 RIBC1Q8N443 379 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 ATAD1Q8NBU5 361 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 EDEM1Q92611 657 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 LRRC39Q96DD0 335 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 KLC2Q9H0B6 622 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TKTL2Q9H0I9 626 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TLR8Q9NR97 1041 aaKnown RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 NINJ2Q9NZG7 142 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 AFF4Q9UHB7 1163 aaKnown RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 ZMYND8Q9ULU4 1186 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-207ENST00000486868 TLR6Q9Y2C9 796 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 HEY1Q9Y5J3 304 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 HTTP42858 3142 aa12.02□□□□□ -0.49
PRKCB-207ENST00000486868 A0A0A0MRY4 1105 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 A0A1W2PQH9 124 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 FGF10O15520 208 aaPredicted RBP12.01□□□□□ -0.49
PRKCB-207ENST00000486868 KCNN4O15554 427 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 SPAG6O75602 509 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 VNN2O95498 520 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 AGTP01019 485 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 ERCC2P18074 760 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 ATP5DP30049 168 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PPM1AP35813 382 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 RABGGTBP53611 331 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 COG7P83436 770 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 CREMQ03060 361 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 RING1Q06587 406 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 PSMD5Q16401 504 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 HIF1AQ16665 826 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 MANEALQ5VSG8 457 aa12.01□□□□□ -0.49
PRKCB-207ENST00000486868 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms