RNA–Protein interactions for RNA: ENST00000486708.1

SFI1-224, Transcript of SFI1 centrin binding protein, human

TSL 2

Gene SFI1, Length 651 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-224	ENST00000486708	ACSBG2	Q5FVE4	666 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SPDYA	Q5MJ70	313 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	GALNT17	Q6IS24	598 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	GJB7	Q6PEY0	223 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	LRFN4	Q6PJG9	635 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	CCDC137	Q6PK04	289 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	IZUMO2	Q6UXV1	221 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	DSTYK	Q6XUX3	929 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	ZNF574	Q6ZN55	896 aa	Predicted RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	MARK2	Q7KZI7	788 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	CYFIP1	Q7L576	1253 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	NLRP9	Q7RTR0	991 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PRUNE1	Q86TP1	453 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	NLRX1	Q86UT6	975 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	VSIG10L	Q86VR7	867 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SPATA24	Q86W54	205 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	FBXO16	Q8IX29	292 aa	Predicted RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TP53INP2	Q8IXH6	220 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	RNF168	Q8IYW5	571 aa	Predicted RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TDH	Q8IZJ6	230 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	NME8	Q8N427	588 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TMEM199	Q8N511	208 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	CELF2-AS1	Q8N7Q2	184 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	STKLD1	Q8NE28	680 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	OR6J1	Q8NGC5	347 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	OLIG1	Q8TAK6	271 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SLC35G2	Q8TBE7	412 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	LZIC	Q8WZA0	190 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	ALG3	Q92685	438 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	MPP4	Q96JB8	637 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TAAR1	Q96RJ0	339 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	FERD3L	Q96RJ6	166 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PIGS	Q96S52	555 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	DDX50	Q9BQ39	737 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	ECSIT	Q9BQ95	431 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PDCD2L	Q9BRP1	358 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	MTG1	Q9BT17	334 aa	Predicted RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	CADM1	Q9BY67	442 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	FGFBP2	Q9BYJ0	223 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	LRRC27	Q9C0I9	530 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PSTPIP2	Q9H939	334 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SIX2	Q9NPC8	291 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PXMP2	Q9NR77	195 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SEPT11	Q9NVA2	429 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	ETNK2	Q9NVF9	386 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	DNAJC17	Q9NVM6	304 aa	Known RBP	4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	NINJ2	Q9NZG7	142 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TBC1D7	Q9P0N9	293 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	ZNF212	Q9UDV6	495 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	TBK1	Q9UHD2	729 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PCYOX1	Q9UHG3	505 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	LNPEP	Q9UIQ6	1025 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	CHMP2B	Q9UQN3	213 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PCDHB14	Q9Y5E9	798 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	PCDHA3	Q9Y5H8	950 aa		4.36	□□□□□ -1.71
SFI1-224	ENST00000486708	SIPA1L1	O43166	1804 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	POLR2A	P24928	1970 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	TMEM265	A0A087WTH1	108 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708		A0A0J9YVX5	310 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	NPHP3-ACAD11	A0A0J9YXS1	232 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	KRTAP9-6	A0A140TA67	174 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	TCRBV7S2A1N4T	A0A589	114 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	ESYT2	A0FGR8	921 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	FAM221B	A6H8Z2	402 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	GFRA2	O00451	464 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	MAGEB2	O15479	319 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	GYG2	O15488	501 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	CYTH3	O43739	400 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	PQBP1	O60828	265 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	EDF1	O60869	148 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	OPHN1	O60890	802 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	TBX10	O75333	385 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	SUPT3H	O75486	399 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	ZNF189	O75820	626 aa	Predicted RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	HAUS5	O94927	633 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	BPNT1	O95861	308 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	TIMP1	P01033	207 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	DLAT	P10515	647 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	ATF2	P15336	505 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	UCHL3	P15374	230 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	NR2F2	P24468	414 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	RPL13	P26373	211 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	PON1	P27169	355 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	GNA11	P29992	359 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	ICAM3	P32942	547 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	RFC2	P35250	354 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	CETN2	P41208	172 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	STAT1	P42224	750 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	GRIA2	P42262	883 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	MAGEA10	P43363	369 aa	Predicted RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	PURA	Q00577	322 aa	Known RBP	4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	DSG1	Q02413	1049 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	KRT17	Q04695	432 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	TLE2	Q04725	743 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	SULT2A1	Q06520	285 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	CBX3	Q13185	183 aa		4.35	□□□□□ -1.71
SFI1-224	ENST00000486708	PPP2R5C	Q13362	524 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms