RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 COMTP21964 271 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 GBP1P32455 592 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 RDXP35241 583 aaKnown RBP13.29□□□□□ -0.28
HDAC6-229ENST00000486665 CXCR3P49682 368 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 TAS2R40P59535 323 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 SLC7A9P82251 487 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 ZC3H12AQ5D1E8 599 aaKnown RBP13.29□□□□□ -0.28
HDAC6-229ENST00000486665 STRADAQ7RTN6 431 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 CMTM8Q8IZV2 173 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 CALR3Q96L12 384 aaKnown RBP13.29□□□□□ -0.28
HDAC6-229ENST00000486665 FCRL2Q96LA5 508 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-229ENST00000486665 ANLNQ9NQW6 1124 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 CCL26Q9Y258 94 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 CPQQ9Y646 472 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 ZNF292O60281 2723 aa13.29□□□□□ -0.28
HDAC6-229ENST00000486665 I6L893 689 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 NARSO43776 548 aaKnown RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 LRCH4O75427 683 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 PRAMEF12O95522 483 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 F9P00740 461 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 CKMP06732 381 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 PFKLP17858 780 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 MIPP30301 263 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 MAN1A1P33908 653 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 NBL1P41271 181 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 TBX4P57082 545 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 ACAP1Q15027 740 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 TRIP4Q15650 581 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 IFI16Q16666 785 aaKnown RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 FAM78AQ5JUQ0 283 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 TXNRD3NBQ6F5E7 133 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 SCYL2Q6P3W7 929 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 FAM131BQ86XD5 332 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 ARID3BQ8IVW6 561 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 ST13P5Q8NFI4 369 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 ZSCAN18Q8TBC5 510 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 SERPINB11Q96P15 392 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 PEBP4Q96S96 227 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 MAGEB5Q9BZ81 275 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 PCSK1NQ9UHG2 260 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
HDAC6-229ENST00000486665 HBS1LQ9Y450 684 aaKnown RBP13.28□□□□□ -0.28
HDAC6-229ENST00000486665 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.28
HDAC6-229ENST00000486665 GOLGA6L9A6NEM1 432 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 LEFTY2O00292 366 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 GREM1O60565 184 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 RNF8O76064 485 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 FTCDO95954 541 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 IGLV3-27P01718 113 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 KLKB1P03952 638 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 IRF1P10914 325 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 IL1R2P27930 398 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 WEE1P30291 646 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 PCK1P35558 622 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 AVPR1AP37288 418 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.29
HDAC6-229ENST00000486665 NUBP1P53384 320 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 COG7P83436 770 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-229ENST00000486665 NT5DC3Q86UY8 548 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 CCDC185Q8N715 623 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 FLCNQ8NFG4 579 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 RSPRY1Q96DX4 576 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 LRRC3BQ96PB8 259 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 KCNK12Q9HB15 430 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 GDE1Q9NZC3 331 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 OBSL1O75147 1896 aa13.27□□□□□ -0.29
HDAC6-229ENST00000486665 FRYLO94915 3013 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 DNAH14Q0VDD8 3507 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 STC2O76061 302 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 TNNT1P13805 278 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 GBP2P32456 591 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ADRA1BP35368 520 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 VIPR2P41587 438 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SLC1A1P43005 524 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 COL4A3Q01955 1670 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SLC25A11Q02978 314 aaKnown RBP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 NNTQ13423 1086 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ATP13A4Q4VNC1 1196 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SND1Q7KZF4 910 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC6-229ENST00000486665 ZSCAN30Q86W11 494 aa13.26□□□□□ -0.29
HDAC6-229ENST00000486665 SLC35F6Q8N357 371 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms