RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 DQX1Q8TE96 717 aaKnown RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 NDRG1Q92597 394 aaKnown RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 E2F7Q96AV8 911 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 PLD4Q96BZ4 506 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 C16orf45Q96MC5 204 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 SLC2A13Q96QE2 648 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TBCBQ99426 244 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 SMOC2Q9H3U7 446 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TASP1Q9H6P5 420 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZWILCHQ9H900 591 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TMEM30AQ9NV96 361 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.23□□□□□ -1.256e-7■□□□□ 8.3
UBR4-214ENST00000486515 TRIM10Q9UDY6 481 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 DNAI1Q9UI46 699 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 CD207Q9UJ71 328 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 NENFQ9UMX5 172 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TFR2Q9UP52 801 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 TLR6Q9Y2C9 796 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZNF510Q9Y2H8 683 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 HBS1LQ9Y450 684 aaKnown RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 ALG6Q9Y672 507 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZFP37Q9Y6Q3 630 aaPredicted RBP7.23□□□□□ -1.25
UBR4-214ENST00000486515 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 KMT2EQ8IZD2 1858 aa7.23□□□□□ -1.25
UBR4-214ENST00000486515 ZZEF1O43149 2961 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 RCCD1A6NED2 376 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 SLC9A3R1O14745 358 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 COCHO43405 550 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 PSTPIP1O43586 416 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 ZRANB2O95218 330 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR4-214ENST00000486515 GJB6O95452 261 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 FTCDO95954 541 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 MOCS2O96007 188 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 F11P03951 625 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 CYBBP04839 570 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 IRF1P10914 325 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 CTNNA2P26232 953 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR4-214ENST00000486515 PAFAH1B1P43034 410 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 DNA2P51530 1060 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 ZNF135P52742 658 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 TAF5Q15542 800 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TEAD2Q15562 447 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TRIP4Q15650 581 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 C15orf59Q2T9L4 293 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 PPP1R15BQ5SWA1 713 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 ERMARDQ5T6L9 678 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 SYPL2Q5VXT5 272 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TXNDC8Q6A555 127 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 MSANTD2Q6P1R3 559 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 OTOP3Q7RTS5 596 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 POLNQ7Z5Q5 900 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 SCD5Q86SK9 330 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TAC4Q86UU9 113 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 FAM131BQ86XD5 332 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 CMTM8Q8IZV2 173 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 SLC35F6Q8N357 371 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 ARL14EPQ8N8R7 260 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 ADAM32Q8TC27 787 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 HSPH1Q92598 858 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 PGAP3Q96FM1 320 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 RBM41Q96IZ5 413 aaKnown RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 BTBD6Q96KE9 485 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 NAP1L3Q99457 506 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 NPY6RQ99463 290 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 NAPGQ99747 312 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 EPAS1Q99814 870 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 FERMT1Q9BQL6 677 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TKTL2Q9H0I9 626 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 KIF9Q9HAQ2 790 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 NMUR1Q9HB89 426 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 ZNF334Q9HCZ1 680 aaPredicted RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 WDR6Q9NNW5 1121 aaKnown RBP7.22□□□□□ -1.25
UBR4-214ENST00000486515 HCFC1R1Q9NWW0 138 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 GDE1Q9NZC3 331 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 TBC1D14Q9P2M4 693 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 SFMBT1Q9UHJ3 866 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 NUDT5Q9UKK9 219 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 NR2E1Q9Y466 385 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 VWA8A3KMH1 1905 aa7.22□□□□□ -1.25
UBR4-214ENST00000486515 PLXNA4Q9HCM2 1894 aa7.21□□□□□ -1.25
UBR4-214ENST00000486515 HELZ2Q9BYK8 2649 aaKnown RBP7.21□□□□□ -1.25
UBR4-214ENST00000486515 TCRBV5S1A1TA0A578 114 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 LRRD1A4D1F6 860 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 C2orf78A6NCI8 922 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 USP27XA6NNY8 438 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 F5H5T6 163 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 H3BRJ5 948 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 KCNK3O14649 394 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 LINC01565O15544 149 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 IRAK2O43187 625 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 CREB3O43889 395 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 KRT1P04264 644 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 ZDHHC11BP0C7U3 371 aa7.21□□□□□ -1.26
UBR4-214ENST00000486515 ZFXP17010 805 aaPredicted RBP7.21□□□□□ -1.26
UBR4-214ENST00000486515 GJA1P17302 382 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms