RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SULT1E1P49888 294 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 AIF1P55008 147 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 OXCT1P55809 520 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 GRSF1Q12849 480 aaKnown RBP eCLIP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 PIGHQ14442 188 aaPredicted RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 GSE1Q14687 1217 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 ANGPT1Q15389 498 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 TAF5Q15542 800 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 MLF2Q15773 248 aaPredicted RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 MPPE1Q53F39 396 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 RABGAP1LQ5R372 815 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 TTC39BQ5VTQ0 682 aaPredicted RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 SYPL2Q5VXT5 272 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 PLEKHA7Q6IQ23 1121 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 STRADAQ7RTN6 431 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 TAC4Q86UU9 113 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 DENND1CQ8IV53 801 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 ADGRG2Q8IZP9 1017 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 CPXM2Q8N436 756 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 DTWD2Q8NBA8 298 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 FNIP1Q8TF40 1166 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 DDI1Q8WTU0 396 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 RXFP2Q8WXD0 754 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 TMA16Q96EY4 203 aaKnown RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 NPY6RQ99463 290 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 RPP25Q9BUL9 199 aaKnown RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 PLA2G2FQ9BZM2 168 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 EBF3Q9H4W6 596 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 ECT2Q9H8V3 914 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 ARHGEF3Q9NR81 526 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 METTL5Q9NRN9 209 aaKnown RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 MYO1AQ9UBC5 1043 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 IP6K2Q9UHH9 426 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 TMEM59LQ9UK28 342 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 AGO1Q9UL18 857 aaKnown RBP8.59□□□□□ -1.03
SF3A1-208ENST00000485618 WNT6Q9Y6F9 365 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 CACNA1HO95180 2353 aa8.59□□□□□ -1.03
SF3A1-208ENST00000485618 DENND4CQ5VZ89 1909 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 SYNJ2BP-COX16A0A087WUM0 186 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 KCNU1A8MYU2 1149 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 EIF3CLB5ME19 914 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 F5H5T6 163 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 MDM4O15151 490 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ACSL4O60488 711 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 IGLV3-27P01718 113 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 TMEM253P0C7T8 217 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ADH5P11766 374 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 PSMA2P25787 234 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 MAGEA1P43355 309 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 MAGEA9P43362 315 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ID4P47928 161 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 CXCR3P49682 368 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 GALCP54803 685 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ATP11AP98196 1134 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 GFPT1Q06210 699 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 PTP4A2Q12974 167 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 LRRC32Q14392 662 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 DHCR24Q15392 516 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 IFI16Q16666 785 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 HADHQ16836 314 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ANO4Q32M45 955 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 EML3Q32P44 896 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ODF2Q5BJF6 829 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 MPP7Q5T2T1 576 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 E4F1Q66K89 784 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 WDR59Q6PJI9 974 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ERMP1Q7Z2K6 904 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 PHLDB2Q86SQ0 1253 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 BBS7Q8IWZ6 715 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 SYNPOQ8N3V7 929 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 FAM3CQ92520 227 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 NT5C3BQ969T7 300 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 C1orf74Q96LT6 269 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 MCEEQ96PE7 176 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 HAPLN3Q96S86 360 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 EIF3CQ99613 913 aaKnown RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 CHP1Q99653 195 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 BBS2Q9BXC9 721 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 SLC2A11Q9BYW1 496 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 OSBPL6Q9BZF3 934 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 RETREG1Q9H6L5 497 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 SPHK2Q9NRA0 654 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 TAS2R14Q9NYV8 317 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 COX16Q9P0S2 106 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 STIM2Q9P246 746 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 CTTNBP2NLQ9P2B4 639 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 DEC1Q9P2X7 70 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 STOML2Q9UJZ1 356 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 CA14Q9ULX7 337 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 EPN1Q9Y6I3 576 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-208ENST00000485618 PIAS3Q9Y6X2 628 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 ANAPC1Q9H1A4 1944 aa8.58□□□□□ -1.04
SF3A1-208ENST00000485618 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms