RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 STOML2Q9UJZ1 356 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 STRIP2Q9ULQ0 834 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 NBEAQ8NFP9 2946 aa13.64□□□□□ -0.23
HDAC6-227ENST00000485102 ITPR1Q14643 2758 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 FLRT2O43155 660 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 CMA1P23946 247 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 GCLMP48507 274 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 EFEMP1Q12805 493 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 TRIP4Q15650 581 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-227ENST00000485102 HLA-BQ31612 363 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 TMEM215Q68D42 235 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 KIAA0907Q7Z7F0 614 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-227ENST00000485102 DENND1CQ8IV53 801 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 ANKRD52Q8NB46 1076 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 OR2T3Q8NH03 318 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 PLD4Q96BZ4 506 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 HEXIM2Q96MH2 286 aaKnown RBP13.63□□□□□ -0.23
HDAC6-227ENST00000485102 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
HDAC6-227ENST00000485102 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-227ENST00000485102 TMEM245Q9H330 911 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 FBRSQ9HAH7 460 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 TOR4AQ9NXH8 423 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 CLEC4EQ9ULY5 219 aa13.63□□□□□ -0.23
HDAC6-227ENST00000485102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 LATS1O95835 1130 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 ACADMP11310 421 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 NR2F2P24468 414 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 PRKCHP24723 683 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 RPL13P26373 211 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 AFF3P51826 1226 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 SUZ12Q15022 739 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 MPPE1Q53F39 396 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 KRT39Q6A163 491 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 PIGZQ86VD9 579 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 SETD7Q8WTS6 366 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 TMEM176AQ96HP8 235 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 MIR1-1HGQ9H1L0 117 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 OLA1Q9NTK5 396 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 EIF2B4Q9UI10 523 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 RASAL2Q9UJF2 1139 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 HPSEQ9Y251 543 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 HBS1LQ9Y450 684 aaKnown RBP13.62□□□□□ -0.23
HDAC6-227ENST00000485102 LOC400499M0QZD8 3231 aa13.62□□□□□ -0.23
HDAC6-227ENST00000485102 IGSF10Q6WRI0 2623 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 FAM237AA0A1B0GTK4 181 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-227ENST00000485102 PCDHGA12O60330 932 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 EPHX1P07099 455 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 KRT13P13646 458 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 CD58P19256 250 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-227ENST00000485102 GRIA4P48058 902 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 RAD23BP54727 409 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC6-227ENST00000485102 SERPINA13PQ6UXR4 307 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 BHLHA9Q7RTU4 235 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 FAM186BQ8IYM0 893 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 GUF1Q8N442 669 aaKnown RBP13.61□□□□□ -0.23
HDAC6-227ENST00000485102 SLC4A11Q8NBS3 891 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 WFIKKN2Q8TEU8 576 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 DDI1Q8WTU0 396 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 CIPCQ9C0C6 399 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 CISHQ9NSE2 258 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 PLA2G4CQ9UP65 541 aa13.61□□□□□ -0.23
HDAC6-227ENST00000485102 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-227ENST00000485102 SLC12A8A0AV02 714 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 TSPAN3O60637 253 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 ZBED1O96006 694 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 HMBSP08397 361 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 TRIM49P0CI25 452 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 TRIM49CP0CI26 452 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 HLA-FP30511 346 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 HARS2P49590 506 aaKnown RBP13.6□□□□□ -0.23
HDAC6-227ENST00000485102 SLC8A3P57103 927 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 ADAM9Q13443 819 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 ZCWPW2Q504Y3 356 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 ZNF394Q53GI3 561 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
HDAC6-227ENST00000485102 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 SCML4Q8N228 414 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 GALNT15Q8N3T1 639 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 FBXL13Q8NEE6 735 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 RHBDD1Q8TEB9 315 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
HDAC6-227ENST00000485102 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
HDAC6-227ENST00000485102 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms