RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PGFP49763 221 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 RAD23BP54727 409 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TNK2Q07912 1038 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MAMLD1Q13495 774 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PIGHQ14442 188 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 VEPH1Q14D04 833 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CNGA2Q16280 664 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TAF12Q16514 161 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 BEND6Q5SZJ8 279 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ZFYVE27Q5T4F4 411 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 NAIF1Q69YI7 327 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TRIM68Q6AZZ1 485 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 FAM171BQ6P995 826 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CCNI2Q6ZMN8 369 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PAQR9Q6ZVX9 377 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 GPRIN1Q7Z2K8 1008 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 FAM35AQ86V20 835 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 UNC93AQ86WB7 457 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ARID3BQ8IVW6 561 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SUGP1Q8IWZ8 645 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 RHOT1Q8IXI2 618 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 UBALD2Q8IYN6 164 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MAB21L3Q8N8X9 362 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SLC4A11Q8NBS3 891 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 B3GALNT2Q8NCR0 500 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 C18orf8Q96DM3 657 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 BTBD6Q96KE9 485 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CYP2S1Q96SQ9 504 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 AP1M1Q9BXS5 423 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SLC46A2Q9BY10 475 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 RAB17Q9H0T7 212 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TBC1D17Q9HA65 648 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ARHGEF3Q9NR81 526 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 IGSF9Q9P2J2 1179 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HESX1Q9UBX0 185 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CHORDC1Q9UHD1 332 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM59LQ9UK28 342 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CDH9Q9ULB4 789 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 UTP11Q9Y3A2 253 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MYOFQ9NZM1 2061 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 H0Y858 1186 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SART1O43290 800 aaKnown RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 MICAL2O94851 1124 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 F11P03951 625 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 GLULP15104 373 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 AVPR2P30518 371 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 CHRNA3P32297 505 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 TUFMP49411 452 aaKnown RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 PEX5P50542 639 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZXDBP98169 803 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SLC7A5Q01650 507 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 GUCY2DQ02846 1103 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 TCF15Q12870 199 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 PTP4A2Q12974 167 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF211Q13398 564 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 CUL1Q13616 776 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 DHX34Q14147 1143 aaKnown RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF268Q14587 947 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 NFE2Q16621 373 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 TUSC1Q2TAM9 212 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 HSP90B2PQ58FF3 399 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 EMBQ6PCB8 327 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 TPRG1Q6ZUI0 275 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 MTSS1LQ765P7 747 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 PHLDB2Q86SQ0 1253 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 FUKQ8N0W3 1084 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 EIF1ADQ8N9N8 165 aaKnown RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 C3orf20Q8ND61 904 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZMIZ2Q8NF64 920 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 MYCBPAPQ8TBZ2 947 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SLC2A14Q8TDB8 520 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 WHAMMQ8TF30 809 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 IFT81Q8WYA0 676 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 TFAP2BQ92481 460 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 KRT35Q92764 455 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SMARCD2Q92925 531 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 CD101Q93033 1021 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 MED10Q9BTT4 135 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 OXCT2Q9BYC2 517 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ELOVL4Q9GZR5 314 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZFP14Q9HCL3 533 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 EPB41L5Q9HCM4 733 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 KRT82Q9NSB4 513 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 HOMER3Q9NSC5 361 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF446Q9NWS9 450 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 GTSE1Q9NYZ3 720 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 DMGDHQ9UI17 866 aaKnown RBP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-216ENST00000484087 HCN4Q9Y3Q4 1203 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 WDR87Q6ZQQ6 2873 aa7.23□□□□□ -1.25
BRCA1-216ENST00000484087 ANTXRLA6NF34 631 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 FAM187AA6NFU0 413 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF197O14709 1029 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 RAD51CO43502 376 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 PHF2O75151 1096 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 ECI2O75521 394 aa7.22□□□□□ -1.25
BRCA1-216ENST00000484087 AP1G2O75843 785 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms