RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 EEF2KO00418 725 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 NUDT17P0C025 328 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HSPA1AP0DMV8 641 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HSPA1BP0DMV9 641 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 YWHAQP27348 245 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ZNF844Q08AG5 666 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 DPYSQ14117 519 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 BTG3Q14201 252 aaPredicted RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 KIAA1841Q6NSI8 718 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 KDM7AQ6ZMT4 941 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 RFX8Q6ZV50 586 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ZC3H18Q86VM9 953 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ZCCHC9Q8N567 271 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 TMEM169Q96HH4 297 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 USP29Q9HBJ7 922 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ARHGEF38Q9NXL2 777 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HMGB1P1B2RPK0 211 aaPredicted RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 VNN2O95498 520 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 IVLP07476 585 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ZSCAN5DPP0CG00 497 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 AMPD1P23109 780 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HTR7P34969 479 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 TUFMP49411 452 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 GDF10P55107 478 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 IFRD2Q12894 506 aaPredicted RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 PPP2R5DQ14738 602 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 PAFAH1B3Q15102 231 aaKnown RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 MGAT5BQ3V5L5 792 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 CEP85LQ5SZL2 805 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 PRSS55Q6UWB4 352 aaPredicted RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 PDZD4Q76G19 769 aaPredicted RBP27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HOOK3Q86VS8 718 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 GPR65Q8IYL9 337 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 FAM71DQ8N9W8 422 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 SERPINB11Q96P15 392 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HAPLN3Q96S86 360 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 HERC2P3Q9BVR0 1158 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 VN1R3Q9BXE9 311 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 CAPS2Q9BXY5 557 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 MAGEB5Q9BZ81 275 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 PHACTR1Q9C0D0 580 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 TKTL2Q9H0I9 626 aa27.15■■□□□ 1.94
SHOX2-204ENST00000483851 ETS1P14921 441 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 RPL22P35268 128 aaKnown RBP27.14■■□□□ 1.94
SHOX2-204ENST00000483851 SLC45A4Q5BKX6 768 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 RNASEH2BQ5TBB1 312 aaKnown RBP27.14■■□□□ 1.94
SHOX2-204ENST00000483851 KCTD16Q68DU8 428 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 EPAS1Q99814 870 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 NMUR1Q9HB89 426 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 AAASQ9NRG9 546 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 SPG21Q9NZD8 308 aa27.14■■□□□ 1.94
SHOX2-204ENST00000483851 A0A1W2PQH9 124 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 CCR1P32246 355 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 GPR15P49685 360 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 DSG1Q02413 1049 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 UBE2Q1Q7Z7E8 422 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 OLFM3Q96PB7 478 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 OLA1Q9NTK5 396 aaKnown RBP27.13■■□□□ 1.93
SHOX2-204ENST00000483851 DTLQ9NZJ0 730 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 PAK5Q9P286 719 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 FARP1Q9Y4F1 1045 aaPredicted RBP27.13■■□□□ 1.93
SHOX2-204ENST00000483851 A6NNZ2 444 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 GBE1Q04446 702 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 TUBB8Q3ZCM7 444 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 TPGS2Q68CL5 300 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 PRUNE1Q86TP1 453 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 PPIL6Q8IXY8 311 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 TTC9BQ8N6N2 239 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 COLGALT1Q8NBJ5 622 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 RNF34Q969K3 372 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 EPB41L4BQ9H329 900 aa27.13■■□□□ 1.93
SHOX2-204ENST00000483851 AFF4Q9UHB7 1163 aaKnown RBP27.13■■□□□ 1.93
SHOX2-204ENST00000483851 WDR27A2RRH5 827 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 CREB3O43889 395 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 PPM1AP35813 382 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 GLUD2P49448 558 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 TPI1P60174 286 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 DUSP4Q13115 394 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 PPIGQ13427 754 aaKnown RBP eCLIP27.12■■□□□ 1.93
SHOX2-204ENST00000483851 DENND2CQ68D51 928 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 CROCCP2Q86T23 111 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 DDX53Q86TM3 631 aaKnown RBP27.12■■□□□ 1.93
SHOX2-204ENST00000483851 QKIQ96PU8 341 aaKnown RBP eCLIP27.12■■□□□ 1.93
SHOX2-204ENST00000483851 SEPT5Q99719 369 aaPredicted RBP27.12■■□□□ 1.93
SHOX2-204ENST00000483851 ANLNQ9NQW6 1124 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 TLR8Q9NR97 1041 aaKnown RBP27.12■■□□□ 1.93
SHOX2-204ENST00000483851 TMPRSS4Q9NRS4 437 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 SLC27A5Q9Y2P5 690 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 GREB1Q4ZG55 1949 aa27.12■■□□□ 1.93
SHOX2-204ENST00000483851 I6L893 689 aaPredicted RBP27.11■■□□□ 1.93
SHOX2-204ENST00000483851 DCLK1O15075 740 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 SLC2A3P11169 496 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 SLC10A2Q12908 348 aaPredicted RBP27.11■■□□□ 1.93
SHOX2-204ENST00000483851 SDHAF4Q5VUM1 108 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 OR2W6PQ8NHA6 318 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 FBXO32Q969P5 355 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 TTLL2Q9BWV7 592 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 CRISPLD1Q9H336 500 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 OR12D3Q9UGF7 316 aa27.11■■□□□ 1.93
SHOX2-204ENST00000483851 MRPL42Q9Y6G3 142 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms