RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 CALCOCO2Q13137 446 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ATP13A4Q4VNC1 1196 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 BOLA3Q53S33 107 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ZFYVE27Q5T4F4 411 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ITIH5Q86UX2 942 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 CCDC105Q8IYK2 499 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PDZD8Q8NEN9 1154 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ADAM32Q8TC27 787 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 DQX1Q8TE96 717 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 OVCA2Q8WZ82 227 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PSMG2Q969U7 264 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PGAP3Q96FM1 320 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 TRMT2BQ96GJ1 504 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 DDX56Q9NY93 547 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 TNRC18O15417 2968 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-210ENST00000483764 SYNJ2BP-COX16A0A087WUM0 186 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 F9P00740 461 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 LRG1P02750 347 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 RALAP11233 206 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 ITIH2P19823 946 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
MRPL28-210ENST00000483764 COPS2P61201 443 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 GNGT1P63211 74 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 ZNF844Q08AG5 666 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 NME3Q13232 169 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
MRPL28-210ENST00000483764 KCNT1Q5JUK3 1230 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 B4GALNT4Q76KP1 1039 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 TRMT10CQ7L0Y3 403 aaKnown RBP17.81■□□□□ 0.44
MRPL28-210ENST00000483764 RTL10Q7L3V2 364 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 RCOR2Q8IZ40 523 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 EXD1Q8NHP7 514 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 ZNF512Q96ME7 567 aaPredicted RBP17.81■□□□□ 0.44
MRPL28-210ENST00000483764 PEBP4Q96S96 227 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 PLEKHA4Q9H4M7 779 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 DDIT4Q9NX09 232 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 COX16Q9P0S2 106 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 CHD7Q9P2D1 2997 aa17.81■□□□□ 0.44
MRPL28-210ENST00000483764 ATXN2Q99700 1313 aaKnown RBP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 PER2O15055 1255 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 RARAP10276 462 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 RARGP13631 454 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 PMS2P54278 862 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 IFFO1Q0D2I5 559 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 UAP1Q16222 522 aaPredicted RBP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 SMTNL2Q2TAL5 461 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 DENND2CQ68D51 928 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 CYP4V2Q6ZWL3 525 aaPredicted RBP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 TAC4Q86UU9 113 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 SLC22A17Q8WUG5 538 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 PGM2Q96G03 612 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 RBM41Q96IZ5 413 aaKnown RBP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 DPH5Q9H2P9 285 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 SMOC2Q9H3U7 446 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 PIGVQ9NUD9 493 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 KLHL11Q9NVR0 708 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.8■□□□□ 0.444e-10■■■■■ 31.1
MRPL28-210ENST00000483764 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
MRPL28-210ENST00000483764 GGA2Q9UJY4 613 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 NUDT5Q9UKK9 219 aa17.8■□□□□ 0.44
MRPL28-210ENST00000483764 IGLV3-25P01717 112 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 KRT1P04264 644 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 EPCAMP16422 314 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 PPP3CCP48454 512 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ADCY2Q08462 1091 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 BYSLQ13895 437 aaKnown RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 TRADDQ15628 312 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 PPM1LQ5SGD2 360 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 SNX30Q5VWJ9 437 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 AADACL2Q6P093 401 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 MSANTD2Q6P1R3 559 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 RBM23Q86U06 439 aaKnown RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 FAM131BQ86XD5 332 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 CMASQ8NFW8 434 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 TEKT4Q8WW24 435 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 HSPH1Q92598 858 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 CASP10Q92851 521 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ART4Q93070 314 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ACSF2Q96CM8 615 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 TRIM51Q9BSJ1 452 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ROPN1BQ9BZX4 212 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 NEUROG2Q9H2A3 272 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 TLE6Q9H808 572 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ROPN1Q9HAT0 212 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 MAN1C1Q9NR34 630 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 TRPM5Q9NZQ8 1165 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 NR2E1Q9Y466 385 aa17.79■□□□□ 0.44
MRPL28-210ENST00000483764 COL4A4P53420 1690 aaPredicted RBP17.79■□□□□ 0.44
MRPL28-210ENST00000483764 ZNF840PA6NDX5 716 aa17.78■□□□□ 0.44
MRPL28-210ENST00000483764 PI4K2BG5E9Z4 385 aa17.78■□□□□ 0.44
MRPL28-210ENST00000483764 EBAG9O00559 213 aa17.78■□□□□ 0.44
MRPL28-210ENST00000483764 PTPN7P35236 360 aa17.78■□□□□ 0.44
MRPL28-210ENST00000483764 MDH1P40925 334 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms