RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-233	ENST00000482563	SEC14L2	O76054	403 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	ALDH1A2	O94788	518 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	CEACAM5	P06731	702 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	SNRPA1	P09661	255 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	SAT1	P21673	171 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	NTSR1	P30989	418 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	AMPH	P49418	695 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	TKTL1	P51854	596 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	KRT76	Q01546	638 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	LRRC74A	Q0VAA2	488 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	TCF15	Q12870	199 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	CR1L	Q2VPA4	569 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	MFSD14B	Q5SR56	506 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	OTUD7B	Q6GQQ9	843 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	KRT80	Q6KB66	452 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	SYT2	Q8N9I0	419 aa	Predicted RBP	7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	TMEM116	Q8NCL8	245 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	TMIE	Q8NEW7	156 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	GSDMB	Q8TAX9	411 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	INTS12	Q96CB8	462 aa	Known RBP	7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	WDR24	Q96S15	920 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	NUDT22	Q9BRQ3	303 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	KCTD5	Q9NXV2	234 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	HESX1	Q9UBX0	185 aa		7.7	□□□□□ -1.18
RBM39-233	ENST00000482563	LOC105369274	A0A096LPK9	316 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	LOC102723532	A0A0G2JNH3	316 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ZC3H12D	A2A288	527 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563		A8MZ25	164 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	EEF2	P13639	858 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CHN1	P15882	459 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	AVPR2	P30518	371 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PNPLA4	P41247	253 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	NPY4R	P50391	375 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ARFIP1	P53367	373 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	KRT17	Q04695	432 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CBX3	Q13185	183 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	MORF4L2	Q15014	288 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PTCHD3	Q3KNS1	767 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	AMOT	Q4VCS5	1084 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	FAM160B1	Q5W0V3	765 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	FAM111B	Q6SJ93	734 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CLEC17A	Q6ZS10	378 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	OR4N4	Q8N0Y3	316 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	DPP10	Q8N608	796 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RFWD2	Q8NHY2	731 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SPATA20	Q8TB22	786 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	MRPS27	Q92552	414 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	DDX17	Q92841	729 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CHFR	Q96EP1	664 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RAB3IP	Q96QF0	476 aa	Predicted RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	TACO1	Q9BSH4	297 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	FANCF	Q9NPI8	374 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	DDX43	Q9NXZ2	648 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PIM2	Q9P1W9	311 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	LAMP5	Q9UJQ1	280 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PCDHGA5	Q9Y5G8	931 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PCDHGA1	Q9Y5H4	931 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	IGSF1	Q8N6C5	1336 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	DIAPH2	O60879	1101 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RASAL1	O95294	804 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	HMOX1	P09601	288 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ZGLP1	P0C6A0	271 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SUPT20HL2	P0C7V6	817 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RAP2A	P10114	183 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RPS2	P15880	293 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	FST	P19883	344 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	TTK	P33981	857 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ADCY8	P40145	1251 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	GPD2	P43304	727 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	TOB1	P50616	345 aa	Predicted RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SLC26A5	P58743	744 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ADAM17	P78536	824 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	AKAP17A	Q02040	695 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CEBPZ	Q03701	1054 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RPA4	Q13156	261 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CLCA4	Q14CN2	919 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SUPT20HL1	Q3ZLR7	823 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	IRGC	Q6NXR0	463 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	GALNT18	Q6P9A2	607 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CCDC73	Q6ZRK6	1079 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	FAM126B	Q8IXS8	530 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CCAR2	Q8N163	923 aa	Known RBP	7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ZNF366	Q8N895	744 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	SAAL1	Q96ER3	474 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	RNFT2	Q96EX2	444 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	C1orf21	Q9H246	121 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	CCDC134	Q9H6E4	229 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	TMLHE	Q9NVH6	421 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	HCN3	Q9P1Z3	774 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	PCDHB7	Q9Y5E2	793 aa		7.69	□□□□□ -1.18
RBM39-233	ENST00000482563	ADGRF5	Q8IZF2	1346 aa		7.68	□□□□□ -1.18
RBM39-233	ENST00000482563		A0A1W2PQJ5	194 aa		7.68	□□□□□ -1.18
RBM39-233	ENST00000482563	AGAP5	A6NIR3	686 aa		7.68	□□□□□ -1.18
RBM39-233	ENST00000482563	C11orf95	C9JLR9	678 aa	Predicted RBP	7.68	□□□□□ -1.18
RBM39-233	ENST00000482563	AGPS	O00116	658 aa		7.68	□□□□□ -1.18
RBM39-233	ENST00000482563	TEX33	O43247	280 aa		7.68	□□□□□ -1.18
RBM39-233	ENST00000482563	MPO	P05164	745 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms