RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 BTKQ06187 659 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 R3HDM1Q15032 1099 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-208ENST00000482558 NKG7Q16617 165 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CYP1B1Q16678 543 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 LCE5AQ5TCM9 118 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ARMC3Q5W041 872 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SLC6A19Q695T7 634 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CDCA2Q69YH5 1023 aaPredicted RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 SLC39A4Q6P5W5 647 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SEPT14Q6ZU15 432 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 FGD2Q7Z6J4 655 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 UBE3DQ7Z6J8 389 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 WDR49Q8IV35 697 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 KLHL7Q8IXQ5 586 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 PHACTR4Q8IZ21 702 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 TTC39CQ8N584 583 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 PLEKHO2Q8TD55 490 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 TAS1R2Q8TE23 839 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 HDAC7Q8WUI4 952 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CASKIN2Q8WXE0 1202 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ZNF653Q96CK0 615 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SAAL1Q96ER3 474 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 HRASLS5Q96KN8 279 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SGCZQ96LD1 299 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 CCDC138Q96M89 665 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ERP44Q9BS26 406 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 MSTO1Q9BUK6 570 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 NFKBIZQ9BYH8 718 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ZNF518BQ9C0D4 1074 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 IKZF4Q9H2S9 585 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 SMARCAD1Q9H4L7 1026 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 RBAKQ9NYW8 714 aaPredicted RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 MTRF1LQ9UGC7 380 aaKnown RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 NFU1Q9UMS0 254 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 PACSIN2Q9UNF0 486 aaPredicted RBP8.11□□□□□ -1.11
SNX13-208ENST00000482558 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
SNX13-208ENST00000482558 WDR90Q96KV7 1748 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 A0A1B0GVC2 190 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 GSTTP1A0A1W2PQM5 241 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 FAM170AA1A519 330 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 TISP43B9A030 160 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 AGPSO00116 658 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 MYO1FO00160 1098 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 NOP56O00567 594 aaKnown RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 SPOPO43791 374 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 HBP1O60381 514 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SHOX2O60902 331 aaPredicted RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 HLA-DRAP01903 254 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 MYZAPP0CAP1 466 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 KRT5P13647 590 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 TM4SF4P48230 202 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 DNA2P51530 1060 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 IL2P60568 153 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CAV1Q03135 178 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CDK5R2Q13319 367 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CUL2Q13617 745 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SLMAPQ14BN4 828 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 MAPK6Q16659 721 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SGSM1Q2NKQ1 1148 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CELF3Q5SZQ8 465 aaKnown RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 PRAMEF13Q5VWM6 474 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CDCP2Q5VXM1 449 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 GADL1Q6ZQY3 521 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SLC47A2Q86VL8 602 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 ZSWIM9Q86XI8 627 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 KIF18BQ86Y91 864 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SLC41A1Q8IVJ1 513 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 BRSK2Q8IWQ3 736 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 KIAA1958Q8N8K9 716 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 ATP8B4Q8TF62 1192 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SLC20A1Q8WUM9 679 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SEMA4DQ92854 862 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SLCO2A1Q92959 643 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CD101Q93033 1021 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 ARHGEF26Q96DR7 871 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 CRB3Q9BUF7 120 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 NUP85Q9BW27 656 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 STMN4Q9H169 189 aaPredicted RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 CNOT8Q9UFF9 292 aaKnown RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 PRDM4Q9UKN5 801 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 PCOLCE2Q9UKZ9 415 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
SNX13-208ENST00000482558 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 TTLL3Q9Y4R7 772 aa8.1□□□□□ -1.11
SNX13-208ENST00000482558 ADGRA3Q8IWK6 1321 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 PASKQ96RG2 1323 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 SIP14410 1827 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 IGKV6-21A0A0C4DH24 114 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 OGTO15294 1046 aa8.09□□□□□ -1.11
SNX13-208ENST00000482558 MAGEB2O15479 319 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms