RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PGK1P00558 417 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 THP07101 528 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 SERPINB9P50453 376 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 ANKRD52Q8NB46 1076 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 B3GALNT2Q8NCR0 500 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 SENP8Q96LD8 212 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 SYT15Q9BQS2 421 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 IARS2Q9NSE4 1012 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 TSR3Q9UJK0 312 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 DLEC1Q9Y238 1755 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 MEI4A8MW99 385 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 METTL18O95568 372 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 PTPN1P18031 435 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 GRM5P41594 1212 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 CDC42EP1Q00587 391 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 LACTB2Q53H82 288 aaPredicted RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 ZNF410Q86VK4 478 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 THEM5Q8N1Q8 247 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 SPDL1Q96EA4 605 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 VCXQ9H320 206 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 LGALS13Q9UHV8 139 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 CHKBQ9Y259 395 aa9.42□□□□□ -0.9
CALD1-220ENST00000482470 PRRC2BQ5JSZ5 2229 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 MYO18AQ92614 2054 aaKnown RBP9.42□□□□□ -0.9
CALD1-220ENST00000482470 CLUHO75153 1309 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 AIM2O14862 343 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CHADO15335 359 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MMP3P08254 477 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SKIP12755 728 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 BDNFP23560 247 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 PTPN4P29074 926 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SCNN1GP51170 649 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 ZNF132P52740 706 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 GHRHRQ02643 423 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 BNIP1Q12981 228 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 POU6F1Q14863 301 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 RPS6KA2Q15349 733 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 ITPRIPL1Q6GPH6 555 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 UNC5AQ6ZN44 842 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 NAT8LQ8N9F0 302 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CMASQ8NFW8 434 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 PDCD6IPQ8WUM4 868 aaKnown RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 MIEF2Q96C03 454 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MTBPQ96DY7 904 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MCRS1Q96EZ8 462 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SPON2Q9BUD6 331 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 CXorf49A8MYA2 514 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 E9PBE3 544 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 KLHL41O60662 606 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 LYPLA1O75608 230 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 SPRP35270 261 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 ETFBP38117 255 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 PSEN2P49810 448 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 GSCP56915 257 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 CLDN10P78369 228 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SOWAHAQ2M3V2 549 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 DUSP28Q4G0W2 176 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SPOUT1Q5T280 376 aaKnown RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 RNF43Q68DV7 783 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 CMC1Q7Z7K0 106 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MIB1Q86YT6 1006 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 SPATA2LQ8IUW3 424 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 TEX9Q8N6V9 391 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 STKLD1Q8NE28 680 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 TTC8Q8TAM2 541 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 PACSIN3Q9UKS6 424 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MFHAS1Q9Y4C4 1052 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CDK5RAP2Q96SN8 1893 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 DCAF8L1A6NGE4 600 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 TOP3BO95985 862 aaKnown RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 FDFT1P37268 417 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CPT1AP50416 773 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 CCNHP51946 323 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 ART3Q13508 389 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 RABGAP1LQ5R372 815 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 EMC10Q5UCC4 262 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 DRICH1Q6PGQ1 229 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 MPP5Q8N3R9 675 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 ATPAF2Q8N5M1 289 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 HDAC11Q96DB2 347 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 P2RY11Q96G91 374 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 ZMAT2Q96NC0 199 aaKnown RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 FRMD8Q9BZ67 464 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 TSPYL2Q9H2G4 693 aaPredicted RBP9.41□□□□□ -0.9
CALD1-220ENST00000482470 SNX10Q9Y5X0 201 aa9.41□□□□□ -0.9
CALD1-220ENST00000482470 IGKV6D-21A0A0A0MT36 114 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms