RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SOBPA7XYQ1 873 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
HDAC1-208ENST00000482310 TSPAN3O60637 253 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ECI2O75521 394 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 RNF8O76064 485 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 KLKB1P03952 638 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ARSAP15289 507 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 TCF4P15884 667 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 CCR1P32246 355 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 HDAC4P56524 1084 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ARCQ7LC44 396 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 NT5C3BQ969T7 300 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 EBF3Q9H4W6 596 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 TRPV4Q9HBA0 871 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 DUS2Q9NX74 493 aaKnown RBP13.74□□□□□ -0.21
HDAC1-208ENST00000482310 TRMT1Q9NXH9 659 aaKnown RBP13.74□□□□□ -0.21
HDAC1-208ENST00000482310 PRKAG3Q9UGI9 489 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 AGO1Q9UL18 857 aaKnown RBP13.74□□□□□ -0.21
HDAC1-208ENST00000482310 GUCA1BQ9UMX6 200 aa13.74□□□□□ -0.21
HDAC1-208ENST00000482310 SHROOM3Q8TF72 1996 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 PSMC3P17980 439 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 WEE1P30291 646 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 KPNA1P52294 538 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-208ENST00000482310 TNK2Q07912 1038 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 RAP1GAP2Q684P5 730 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 NUGGCQ68CJ6 796 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 TPGS1Q6ZTW0 290 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 CHSY1Q86X52 802 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 UNC45BQ8IWX7 931 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 TXLNBQ8N3L3 684 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 ATP6V0D2Q8N8Y2 350 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 SLC39A13Q96H72 371 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 TRMT61BQ9BVS5 477 aaKnown RBP13.73□□□□□ -0.21
HDAC1-208ENST00000482310 MAGEB5Q9BZ81 275 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 BRD9Q9H8M2 597 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 KLHL11Q9NVR0 708 aa13.73□□□□□ -0.21
HDAC1-208ENST00000482310 THG1LQ9NWX6 298 aaKnown RBP13.73□□□□□ -0.21
HDAC1-208ENST00000482310 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PJA2O43164 708 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 ACSL4O60488 711 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 BUB1BO60566 1050 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-208ENST00000482310 LRCH4O75427 683 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PAGE1O75459 146 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PROSCO94903 275 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 F9P00740 461 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 MIPP30301 263 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 SLC11A2P49281 568 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 CXCR3P49682 368 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 NNTQ13423 1086 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PIGHQ14442 188 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-208ENST00000482310 ZFYVE27Q5T4F4 411 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 Q6ZNB5 142 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 DAAM2Q86T65 1068 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 SLC44A3Q8N4M1 653 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 OSCP1Q8WVF1 389 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 HSPH1Q92598 858 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 PGAP3Q96FM1 320 aaPredicted RBP13.72□□□□□ -0.21
HDAC1-208ENST00000482310 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC1-208ENST00000482310 OBP2AQ9NY56 170 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 SLC12A6Q9UHW9 1150 aa13.72□□□□□ -0.21
HDAC1-208ENST00000482310 NUP205Q92621 2012 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 FAM86C2PA6NEL3 165 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 USP27XA6NNY8 438 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 I6L893 689 aaPredicted RBP13.71□□□□□ -0.21
HDAC1-208ENST00000482310 KRT86O43790 486 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 SPOPO43791 374 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 GREM1O60565 184 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 MTA2O94776 668 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 SLC2A3P11169 496 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 TCF3P15923 654 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 SLC6A4P31645 630 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 ARHGAP25P42331 645 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 SGSHP51688 502 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 TAS2R40P59535 323 aa13.71□□□□□ -0.21
HDAC1-208ENST00000482310 RING1Q06587 406 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms