RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 EXOC3O60645 756 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 C1QL1O75973 258 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 MT-CO3P00414 261 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 SLPIP03973 132 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 GDF5P43026 501 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 PTH2RP49190 550 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 JAK3P52333 1124 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 INHBCP55103 352 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 GAB1Q13480 694 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 SMAD1Q15797 465 aaKnown RBP6.49□□□□□ -1.37
SF3B1-210ENST00000482158 FAM153CQ494X1 144 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 HSP90AB4PQ58FF6 505 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 ANKRD40Q6AI12 368 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 CEP85Q6P2H3 762 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 SLC16A11Q8NCK7 471 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 REXO5Q96IC2 774 aaKnown RBP6.49□□□□□ -1.37
SF3B1-210ENST00000482158 AGAP2Q99490 1192 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 DUSP26Q9BV47 211 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 ELOVL1Q9BW60 279 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 CPNE5Q9HCH3 593 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 LIN7CQ9NUP9 197 aaKnown RBP6.49□□□□□ -1.37
SF3B1-210ENST00000482158 RRN3Q9NYV6 651 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 TLK1Q9UKI8 766 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 RAB21Q9UL25 225 aa6.49□□□□□ -1.37
SF3B1-210ENST00000482158 E7EVH7 732 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 CYR61O00622 381 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 FYB1O15117 783 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 HEXIM1O94992 359 aaKnown RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 KAT7O95251 611 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 C1RP00736 705 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 TK1P04183 234 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 DUSP1P28562 367 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 SERPINA4P29622 427 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 SOX10P56693 466 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 HOXA4Q00056 320 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 RPS6KA2Q15349 733 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 KYAT3Q6YP21 454 aaKnown RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 TRIM72Q6ZMU5 477 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 AMIGO2Q86SJ2 522 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 FAM98AQ8NCA5 519 aaKnown RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 AFG1LQ8WV93 481 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 CPT1BQ92523 772 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 FAR2Q96K12 515 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 IKZF4Q9H2S9 585 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 NDUFAF4Q9P032 175 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 TRPC5Q9UL62 973 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-210ENST00000482158 RCE1Q9Y256 329 aa6.48□□□□□ -1.37
SF3B1-210ENST00000482158 C16orf96A6NNT2 1141 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 TARM1B6A8C7 271 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 H7C1Q1 480 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 KRT38O76015 456 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 CYP3A4P08684 503 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 NHLRC4P0CG21 123 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-210ENST00000482158 PAX3P23760 479 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 RBM6P78332 1123 aaKnown RBP6.47□□□□□ -1.37
SF3B1-210ENST00000482158 EFR3AQ14156 821 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 DCTN1Q14203 1278 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 FAM110CQ1W6H9 321 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 ADCK5Q3MIX3 580 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 ZNF569Q5MCW4 686 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 SYT13Q7L8C5 426 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 ANKS1BQ7Z6G8 1248 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 CPOQ8IVL8 374 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 SARAFQ96BY9 339 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 DAZAP1Q96EP5 407 aaKnown RBP6.47□□□□□ -1.37
SF3B1-210ENST00000482158 ARHGAP39Q9C0H5 1083 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 SEMA4GQ9NTN9 838 aa6.47□□□□□ -1.37
SF3B1-210ENST00000482158 C9orf78Q9NZ63 289 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-210ENST00000482158 ARPP21Q9UBL0 812 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-210ENST00000482158 CLIC1O00299 241 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 NCAM2O15394 837 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 JTBO76095 146 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 MATN1P21941 496 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 SFPQP23246 707 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B1-210ENST00000482158 MAPK9P45984 424 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 AARSP49588 968 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B1-210ENST00000482158 ACTR2P61160 394 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 WDR5P61964 334 aaKnown RBP6.46□□□□□ -1.38
SF3B1-210ENST00000482158 MFSD13AQ14CX5 517 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 LARS2Q15031 903 aaKnown RBP6.46□□□□□ -1.38
SF3B1-210ENST00000482158 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 LVRNQ6Q4G3 990 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 C2CD5Q86YS7 1000 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 CLEC4CQ8WTT0 213 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 GGA3Q9NZ52 723 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 SH3BP4Q9P0V3 963 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 GJD2Q9UKL4 321 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 GTF2A1LQ9UNN4 478 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 SLC12A4Q9UP95 1085 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 LRRFIP2Q9Y608 721 aaKnown RBP6.46□□□□□ -1.38
SF3B1-210ENST00000482158 SPATA31A1Q5TZJ5 1347 aa6.46□□□□□ -1.38
SF3B1-210ENST00000482158 AGAP5A6NIR3 686 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-210ENST00000482158 PRYO14603 147 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 NPHP1O15259 732 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 CYP2D6P10635 497 aa6.45□□□□□ -1.38
SF3B1-210ENST00000482158 AGTR2P50052 363 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms