RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CAPRIN2Q6IMN6 1127 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 PSTKQ8IV42 348 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 WDR75Q8IWA0 830 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 MPP5Q8N3R9 675 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 HSFY1Q96LI6 401 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 FAM167BQ9BTA0 163 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 SNX25Q9H3E2 840 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 FAM96AQ9H5X1 160 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 STN1Q9H668 368 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 DTLQ9NZJ0 730 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 RBM47A0AV96 593 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 H3BRJ5 948 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 OPHN1O60890 802 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 DGKIO75912 1065 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 SERPINA6P08185 405 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 PGAM1P18669 254 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 TFE3P19532 575 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 ADORA2BP29275 332 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 SESN3P58005 492 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 ACSBG2Q5FVE4 666 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 LRRC8BQ6P9F7 803 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 LRRN4Q8WUT4 740 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 ZNF560Q96MR9 790 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 MTMR10Q9NXD2 777 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
C9orf3-218ENST00000482056 UBQLN1Q9UMX0 589 aaKnown RBP15.84■□□□□ 0.13
C9orf3-218ENST00000482056 WDR27A2RRH5 827 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 F8W8V4 182 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 CYB561D2O14569 222 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 PPEF2O14830 753 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 XPOTO43592 962 aaKnown RBP15.83■□□□□ 0.12
C9orf3-218ENST00000482056 GABBR2O75899 941 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 CD4P01730 458 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 KITP10721 976 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 SKIP12755 728 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 AMPD1P23109 780 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 RPL34P49207 117 aaKnown RBP15.83■□□□□ 0.12
C9orf3-218ENST00000482056 RCN2Q14257 317 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 ZBTB6Q15916 424 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 SOWAHAQ2M3V2 549 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 FAM182AQ5T1J6 154 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 NOTUMQ6P988 496 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 APLFQ8IW19 511 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-218ENST00000482056 CRYBG2Q8N1P7 616 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 COLGALT1Q8NBJ5 622 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 CLEC4CQ8WTT0 213 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 OLFM3Q96PB7 478 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 ZFATQ9P243 1243 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 TXNDC16Q9P2K2 825 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 STX18Q9P2W9 335 aaKnown RBP15.83■□□□□ 0.12
C9orf3-218ENST00000482056 TUBGCP4Q9UGJ1 667 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 DCDC2Q9UHG0 476 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 ANGPTL2Q9UKU9 493 aa15.83■□□□□ 0.12
C9orf3-218ENST00000482056 HMX2A2RU54 273 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 CAPN9O14815 690 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 KRT36O76013 467 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 CCDC130P13994 396 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 GNL1P36915 607 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 PNPLA4P41247 253 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 PCBP1Q15365 356 aaKnown RBP eCLIP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ZNF792Q3KQV3 632 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 FASTKD1Q53R41 847 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 FBXO47Q5MNV8 452 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 SNX30Q5VWJ9 437 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 NET1Q7Z628 596 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 CCDC185Q8N715 623 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 OPTNQ96CV9 577 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 SPDL1Q96EA4 605 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 FAM161BQ96MY7 647 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ZMAT2Q96NC0 199 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 NMRK1Q9NWW6 199 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 MARCOQ9UEW3 520 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 RRN3P2A6NIE6 340 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 GOT1P17174 413 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 GARSP41250 739 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 MATKP42679 507 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ABL2P42684 1182 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 SULT1E1P49888 294 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ATXN1P54253 815 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ALDH18A1P54886 795 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 MXRA7P84157 204 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 KLC1Q07866 573 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 NIPAL4Q0D2K0 466 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 PDK1Q15118 436 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 KIZQ2M2Z5 673 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 TRMT5Q32P41 509 aaKnown RBP15.82■□□□□ 0.12
C9orf3-218ENST00000482056 LRRC74BQ6ZQY2 392 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 SCUBE1Q8IWY4 988 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ADGRF2Q8IZF7 708 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 PPP4R1Q8TF05 950 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 TNIP3Q96KP6 325 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 XPNPEP3Q9NQH7 507 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 ARHGEF4Q9NR80 690 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms