RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CCDC154A6NI56 674 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 RNF103O00237 685 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 OPLAHO14841 1288 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP1A2P05177 515 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PPP2R1BP30154 601 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 RARRES1P49788 294 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 IFI35P80217 286 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 N4BP2L1Q5TBK1 243 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 RSBN1Q5VWQ0 802 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 KIAA0408Q6ZU52 694 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SLFN11Q7Z7L1 901 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM126BQ8IXS8 530 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 C8orf59Q8N0T1 100 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MIER2Q8N344 545 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 NKAPQ8N5F7 415 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 C12orf50Q8NA57 414 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SNRNP27Q8WVK2 155 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 EMILIN2Q9BXX0 1053 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 IL22Q9GZX6 179 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 OSGEPQ9NPF4 335 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PRDM8Q9NQV8 689 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNRF3Q9ULT6 936 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 INO80Q9ULG1 1556 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM220BPB1ANY3 271 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SERPINF2P08697 491 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 VAV1P15498 845 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ADORA2BP29275 332 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BLVRAP53004 296 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ATP6V0D1P61421 351 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 COPZ1P61923 177 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BST2Q10589 180 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PRR5LQ6MZQ0 368 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PKN3Q6P5Z2 889 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 C15orf52Q6ZUT6 534 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ZFAND2BQ8WV99 257 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 HOPXQ9BPY8 73 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PDCD2LQ9BRP1 358 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TAS2R13Q9NYV9 303 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 USP18Q9UMW8 372 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 GSTK1Q9Y2Q3 226 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TPST1O60507 370 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BGNP21810 368 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 IFNGR2P38484 337 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CSNK2BP67870 215 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM187BQ17R55 369 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ZC2HC1CQ53FD0 456 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TTMPQ5BVD1 217 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 INTS6LQ5JSJ4 861 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 HYIQ5T013 277 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 THEMIS2Q5TEJ8 643 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 WDR59Q6PJI9 974 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 POTEHQ6S545 545 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 STRA8Q7Z7C7 330 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PQLC1Q8N2U9 271 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MINDY2Q8NBR6 621 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 HTR3CQ8WXA8 447 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SH3KBP1Q96B97 665 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MTERF3Q96E29 417 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MTMR9Q96QG7 549 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MYLK2Q9H1R3 596 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 EPB41L4BQ9H329 900 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PHF11Q9UIL8 331 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 LEF1Q9UJU2 399 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TM7SF2O76062 418 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 UQCRBP14927 111 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PAX7P23759 505 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 GNL1P36915 607 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SPIRE1Q08AE8 756 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BFSP2Q13515 415 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 DCAF6Q58WW2 860 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CDC73Q6P1J9 531 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MFSD7Q6UXD7 560 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BRINP3Q76B58 766 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 RNF135Q8IUD6 432 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM139Q8IV31 216 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 OR7A2PQ8NGA2 310 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 OTULINQ96BN8 352 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PABPC5Q96DU9 382 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CLK4Q9HAZ1 481 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CISHQ9NSE2 258 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ARHGAP28Q9P2N2 729 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 VAV3Q9UKW4 847 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 AXIN2Q9Y2T1 843 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MFHAS1Q9Y4C4 1052 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ACKR2O00590 384 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 KLRC4O43908 158 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 MED24O75448 989 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 SNAPC5O75971 98 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 PABPC1P11940 636 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 LHX1P48742 406 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BST1Q10588 318 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CEP78Q5JTW2 689 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms