RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FAM217AQ8IXS0 508 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 TRIM11Q96F44 468 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 CHP1Q99653 195 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 SELENOOQ9BVL4 669 aa27.86■■■□□ 2.05
CCM2-211ENST00000478582 CYP17A1P05093 508 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 MYBL1P10243 752 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 CHKAP35790 457 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 DHCR24Q15392 516 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 SLC18A3Q16572 532 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 OTUD1Q5VV17 481 aaPredicted RBP27.85■■■□□ 2.05
CCM2-211ENST00000478582 PLEKHA7Q6IQ23 1121 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 DNAJC24Q6P3W2 148 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 ALKBH5Q6P6C2 394 aaKnown RBP27.85■■■□□ 2.05
CCM2-211ENST00000478582 BNIPLQ7Z465 357 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 FAM204AQ9H8W3 233 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 SPATA6Q9NWH7 488 aaPredicted RBP27.85■■■□□ 2.05
CCM2-211ENST00000478582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.85■■■□□ 2.057e-6■□□□□ 10.1
CCM2-211ENST00000478582 DDIT4Q9NX09 232 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 IMPACTQ9P2X3 320 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 CACNA1IQ9P0X4 2223 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 PIEZO1Q92508 2521 aa27.85■■■□□ 2.05
CCM2-211ENST00000478582 C2CD4BA6NLJ0 364 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 SPECC1L-ADORA2AF8WAN1 911 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 M0QYT0 321 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 F9P00740 461 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 SOX9P48436 509 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 AMPD2Q01433 879 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 DNAAF5Q86Y56 855 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 CPXM2Q8N436 756 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 EMC1Q8N766 993 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 JOSD2Q8TAC2 188 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 TTC8Q8TAM2 541 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 PANX2Q96RD6 677 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 NHEJ1Q9H9Q4 299 aaPredicted RBP27.84■■■□□ 2.05
CCM2-211ENST00000478582 SPHK2Q9NRA0 654 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 PARVAQ9NVD7 372 aa27.84■■■□□ 2.05
CCM2-211ENST00000478582 ENDOD1O94919 500 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 ADH1CP00326 375 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 SLC2A3P11169 496 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 CTHP32929 405 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 GJA4P35212 333 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 RFC1P35251 1148 aaPredicted RBP27.83■■■□□ 2.05
CCM2-211ENST00000478582 SULT1E1P49888 294 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 MAMLD1Q13495 774 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 LY6G5CQ5SRR4 150 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 CCDC122Q5T0U0 273 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 RXFP2Q8WXD0 754 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 CHFRQ96EP1 664 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 CCDC42Q96M95 316 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 ADAM33Q9BZ11 813 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 DEF6Q9H4E7 631 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 LMAN1LQ9HAT1 526 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 MARK1Q9P0L2 795 aa27.83■■■□□ 2.05
CCM2-211ENST00000478582 LAMTOR5O43504 91 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 GJB6O95452 261 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 PDGFRAP16234 1089 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 TFE3P19532 575 aaPredicted RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 PTPN9P43378 593 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 GAD2Q05329 585 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 GFPT1Q06210 699 aaPredicted RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 PPP2R5DQ14738 602 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 ZC3H12AQ5D1E8 599 aaKnown RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 ADGRF1Q5T601 910 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 MAML2Q8IZL2 1156 aaPredicted RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 CFAP57Q96MR6 1250 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 TBCBQ99426 244 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 IRX2Q9BZI1 471 aaPredicted RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 CALCOCO1Q9P1Z2 691 aa27.82■■■□□ 2.04
CCM2-211ENST00000478582 CNOT8Q9UFF9 292 aaKnown RBP27.82■■■□□ 2.04
CCM2-211ENST00000478582 GOLGA6L3A6NEY3 463 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 KCNU1A8MYU2 1149 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 HOXC11O43248 304 aaPredicted RBP27.81■■■□□ 2.04
CCM2-211ENST00000478582 AKR1B10O60218 316 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 ACSL4O60488 711 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 APOEP02649 317 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 SP9P0CG40 484 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 CHRNB1P11230 501 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 FECHP22830 423 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 SDC4P31431 198 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 CCR1P32246 355 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 SLC11A2P49281 568 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 CXCR3P49682 368 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 MTA1Q13330 715 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 GAB4Q2WGN9 574 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 CCDC14Q49A88 953 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 TXNDC11Q6PKC3 985 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 TMEM25Q86YD3 366 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 ZNF653Q96CK0 615 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 CHRDQ9H2X0 955 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 GRPEL1Q9HAV7 217 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 FBXO4Q9UKT5 387 aa27.81■■■□□ 2.04
CCM2-211ENST00000478582 ANKRD62A6NC57 917 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 GFRA2O00451 464 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 ADH5P11766 374 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 GPD1P21695 349 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 RPL7AP62424 266 aaKnown RBP27.8■■■□□ 2.04
CCM2-211ENST00000478582 NME3Q13232 169 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 MAMSTRQ6ZN01 415 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 ATP6V0D2Q8N8Y2 350 aa27.8■■■□□ 2.04
CCM2-211ENST00000478582 CENPIQ92674 756 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms