RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 TRIM67Q6ZTA4 783 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 STRADAQ7RTN6 431 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 CPXM2Q8N436 756 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 SPHK2Q9NRA0 654 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 MARK1Q9P0L2 795 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 EPN1Q9Y6I3 576 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 PIAS3Q9Y6X2 628 aa13.71□□□□□ -0.21
EXOSC1-209ENST00000477692 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 GFRA2O00451 464 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CCP110O43303 1012 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 NDUFA10O95299 355 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 MOCS2O96007 188 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 ADH1CP00326 375 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 GLULP15104 373 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 GJA4P35212 333 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CHKAP35790 457 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 SOX9P48436 509 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 SLC11A2P49281 568 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 NR1H3Q13133 447 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CDO1Q16878 200 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 RAB6CQ53S08 254 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 BRMS1LQ5PSV4 323 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 ADGRF1Q5T601 910 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 TMEM25Q86YD3 366 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 SIX5Q8N196 739 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CTNNBL1Q8WYA6 563 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 RNF34Q969K3 372 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CHFRQ96EP1 664 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 MSANTD3Q96H12 275 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 BTN2A3PQ96KV6 586 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 NUP85Q9BW27 656 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 RAB6CQ9H0N0 254 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 INTUQ9ULD6 942 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
EXOSC1-209ENST00000477692 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 ADH5P11766 374 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 PSMA2P25787 234 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 SLC6A4P31645 630 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 CTHP32929 405 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 MAGEA1P43355 309 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 VCPP55072 806 aaKnown RBP13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 HDAC4P56524 1084 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 STARD6P59095 220 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 GAD2Q05329 585 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 MTA1Q13330 715 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 TPGS1Q6ZTW0 290 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 TPRG1Q6ZUI0 275 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 FAM131BQ86XD5 332 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 P2RY11Q96G91 374 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 DDX50Q9BQ39 737 aaKnown RBP13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 IRX2Q9BZI1 471 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 TKTL2Q9H0I9 626 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 ANLNQ9NQW6 1124 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 UVRAGQ9P2Y5 699 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 SLC12A6Q9UHW9 1150 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 TECTAO75443 2155 aa13.69□□□□□ -0.22
EXOSC1-209ENST00000477692 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 M0R296 226 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 MAN2B1O00754 1011 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 HOXC11O43248 304 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 PAGE1O75459 146 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 AMPD2Q01433 879 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 SPA17Q15506 151 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 ANO4Q32M45 955 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 PIK3R6Q5UE93 754 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 C1orf228Q6PIY5 440 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 TXNDC11Q6PKC3 985 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 SHDQ96IW2 340 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 PCDHA13Q9Y5I0 950 aa13.68□□□□□ -0.22
EXOSC1-209ENST00000477692 TRIOO75962 3097 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms