RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 PLTPP55058 493 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 GALNT2Q10471 571 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 FASTKD3Q14CZ7 662 aaKnown RBP12.56□□□□□ -0.4
PRPF39-203ENST00000477626 RASA2Q15283 850 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 THEM5Q8N1Q8 247 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 COLGALT1Q8NBJ5 622 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 PRDM10Q9NQV6 1147 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 M0QYT0 321 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 SOD2P04179 222 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 CSF2RAP15509 400 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 CDR1P51861 262 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 PIK3R6Q5UE93 754 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 TRMT10CQ7L0Y3 403 aaKnown RBP12.56□□□□□ -0.4
PRPF39-203ENST00000477626 DDX53Q86TM3 631 aaKnown RBP12.56□□□□□ -0.4
PRPF39-203ENST00000477626 MYEOVQ96EZ4 313 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 MCMBPQ9BTE3 642 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 TTPALQ9BTX7 342 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
PRPF39-203ENST00000477626 LGALS13Q9UHV8 139 aa12.56□□□□□ -0.4
PRPF39-203ENST00000477626 FEZ2Q9UHY8 353 aaPredicted RBP12.56□□□□□ -0.4
PRPF39-203ENST00000477626 A0A1W2PQH9 124 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TBKBP1A7MCY6 615 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ALDH2P05091 517 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 FAM171A1Q5VUB5 890 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 NUP93Q8N1F7 819 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 OR2W6PQ8NHA6 318 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 VOPP1Q96AW1 172 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TRMT2BQ96GJ1 504 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 STOML2Q9UJZ1 356 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TLR6Q9Y2C9 796 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TEX264Q9Y6I9 313 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 COL4A2P08572 1712 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 APOL1O14791 398 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 HTR7P34969 479 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ZNF135P52742 658 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 EFHC2Q5JST6 749 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 SH2D5Q6ZV89 423 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ADAM32Q8TC27 787 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 PGM2Q96G03 612 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 PRG3Q9Y2Y8 225 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ANKRD36A6QL64 1941 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 HACD1B0YJ81 288 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 RNF40O75150 1001 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TTC4O95801 387 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 OLFM2O95897 454 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 STIP1P31948 543 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 TSPY1Q01534 308 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ROR1Q01973 937 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ZNF33AQ06730 810 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 PPIDQ08752 370 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 SEMA5AQ13591 1074 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 BRMS1LQ5PSV4 323 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 IZUMO3Q5VZ72 239 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 SIX6OS1Q8N1H7 587 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 HAUS1Q96CS2 278 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 ZBP1Q9H171 429 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 XPO7Q9UIA9 1087 aaKnown RBP12.55□□□□□ -0.4
PRPF39-203ENST00000477626 SNX10Q9Y5X0 201 aa12.55□□□□□ -0.4
PRPF39-203ENST00000477626 DRGXA6NNA5 263 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 H3BNC9 293 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 CHADO15335 359 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 METTL18O95568 372 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 AMPD1P23109 780 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 CD68P34810 354 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 GJC1P36383 396 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 IKBKEQ14164 716 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TFDP2Q14188 446 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 DDR2Q16832 855 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 DCP1BQ8IZD4 617 aaKnown RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 SPPL2BQ8TCT7 592 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 FETUBQ9UGM5 382 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 RBL1P28749 1068 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 ELAVL2Q12926 359 aaKnown RBP12.54□□□□□ -0.4
PRPF39-203ENST00000477626 IHHQ14623 411 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 TERF2Q15554 542 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 FAM182AQ5T1J6 154 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 NADSYN1Q6IA69 706 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
PRPF39-203ENST00000477626 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms