RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZCCHC18P0CG32 403 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 ITGAXP20702 1163 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CCR1P32246 355 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 SREBF1P36956 1147 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 SLC26A2P50443 739 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 SYTL1Q8IYJ3 562 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 RBM22Q9NW64 420 aaKnown RBP eCLIP19.04■□□□□ 0.648e-7■■■■■ 29.1
VARS2-209ENST00000477288 TECPR2O15040 1411 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CNPP09543 421 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 CYP2F1P24903 491 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 GRK4P32298 578 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CRYMQ14894 314 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 SPOCD1Q6ZMY3 1216 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 COLGALT1Q8NBJ5 622 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 NOA1Q8NC60 698 aaKnown RBP19.04■□□□□ 0.64
VARS2-209ENST00000477288 ERGIC2Q96RQ1 377 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CNPY3Q9BT09 278 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 KLHL25Q9H0H3 589 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 KLHL31Q9H511 634 aa19.04■□□□□ 0.64
VARS2-209ENST00000477288 CLK2P49760 499 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.03■□□□□ 0.64
VARS2-209ENST00000477288 ZCWPW2Q504Y3 356 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 PPM1LQ5SGD2 360 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 METTL7BQ6UX53 244 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 BCL2L14Q9BZR8 327 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 SPATC1LQ9H0A9 340 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 NCKAP1Q9Y2A7 1128 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 FAM220BPB1ANY3 271 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 RBP1P09455 135 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 CYP2A7P20853 494 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 RENBPP51606 427 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 MRPS35P82673 323 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 C1DQ13901 141 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 GIT2Q14161 759 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 PDPK2PQ6A1A2 396 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 TPD52L3Q96J77 140 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 ZNF518BQ9C0D4 1074 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 CARD9Q9H257 536 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 NOD2Q9HC29 1040 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 KLHL28Q9NXS3 571 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 DUSP12Q9UNI6 340 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 SNCAIPQ9Y6H5 919 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 INSRRP14616 1297 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 PPP2R1BP30154 601 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 PTPN11Q06124 597 aaPredicted RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 GRIK3Q13003 919 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 ITGA9Q13797 1035 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 TOMM20Q15388 145 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 MAP1SQ66K74 1059 aaPredicted RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 FAM228AQ86W67 206 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 ELOA2Q8IYF1 753 aaPredicted RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 ITGA11Q9UKX5 1188 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 RAD54BQ9Y620 910 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 MAPK7Q13164 816 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 SLC47A2Q86VL8 602 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 SPPL2AQ8TCT8 520 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 ARMC7Q9H6L4 198 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 ATP13A1Q9HD20 1204 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 PPIEQ9UNP9 301 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 OR1E1P30953 314 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 RAB27AP51159 221 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 BOP1Q14137 746 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 POU6F1Q14863 301 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 OASLQ15646 514 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 SLC44A4Q53GD3 710 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 MARC1Q5VT66 337 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 TMEM159Q96B96 161 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 CEP41Q9BYV8 373 aa19.03■□□□□ 0.64
VARS2-209ENST00000477288 MRPL42Q9Y6G3 142 aaKnown RBP19.03■□□□□ 0.64
VARS2-209ENST00000477288 SAC3D1A6NKF1 404 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 MFSD10Q14728 455 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 RSPH9Q9H1X1 276 aaPredicted RBP19.02■□□□□ 0.64
VARS2-209ENST00000477288 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 PDE5AO76074 875 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 ACADSP16219 412 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 PTPN3P26045 913 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 IRAK1P51617 712 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 AGKQ53H12 422 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 RETSATQ6NUM9 610 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 SEPHS2Q99611 448 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 TMEM120AQ9BXJ8 343 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 PACSIN1Q9BY11 444 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 FBXO44Q9H4M3 255 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.02■□□□□ 0.64
VARS2-209ENST00000477288 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 PSMB9P28065 219 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 INAQ16352 499 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 PHF21BQ96EK2 531 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 MAGEB18Q96M61 343 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 XPNPEP3Q9NQH7 507 aa19.02■□□□□ 0.64
VARS2-209ENST00000477288 DDNO94850 711 aaPredicted RBP19.02■□□□□ 0.63
VARS2-209ENST00000477288 BGNP21810 368 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 ZSWIM2Q8NEG5 633 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 TAS1R2Q8TE23 839 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 CATSPER2Q96P56 530 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 PAFAH2Q99487 392 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 CYP3A43Q9HB55 503 aa19.02■□□□□ 0.63
VARS2-209ENST00000477288 RPRD1BQ9NQG5 326 aaKnown RBP19.02■□□□□ 0.63
VARS2-209ENST00000477288 ACOT9Q9Y305 439 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms