RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CEP57L1Q8IYX8 460 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 LRRC15Q8TF66 581 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 FBXO32Q969P5 355 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PCED1BQ96HM7 432 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 CLIC6Q96NY7 704 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 XPO6Q96QU8 1125 aaKnown RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 FBXO44Q9H4M3 255 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 SIX4Q9UIU6 781 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 LSM7Q9UK45 103 aaKnown RBP7.69□□□□□ -1.18
BRCA1-214ENST00000477152 CPQQ9Y646 472 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PTPRDP23468 1912 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 NUP205Q92621 2012 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 MYH10P35580 1976 aa7.69□□□□□ -1.18
BRCA1-214ENST00000477152 PVALEFA0A1B0GWK0 134 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF840PA6NDX5 716 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 OTOL1A6NHN0 477 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 F8VP50 259 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 AP5Z1O43299 807 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 STX6O43752 255 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 EXOC3O60645 756 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TADA3O75528 432 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 HSP90AA1P07900 732 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ADH5P11766 374 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CEACAM1P13688 526 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CSRP1P21291 193 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 PMLP29590 882 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 NASPP49321 788 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TUBP50607 506 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 NOVA1P51513 510 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CDR1P51861 262 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CASP5P51878 434 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TAF10Q12962 218 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 BIRC3Q13489 604 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 SEPT6Q14141 434 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 DHCR24Q15392 516 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CRY1Q16526 586 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF667Q5HYK9 610 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ANO7Q6IWH7 933 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 PKN3Q6P5Z2 889 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 UNC13DQ70J99 1090 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 LIMS2Q7Z4I7 341 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 RASSF3Q86WH2 238 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ADGRG2Q8IZP9 1017 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC150Q8NCX0 1101 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 SMARCD1Q96GM5 515 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 C7orf25Q9BPX7 421 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 IMPG2Q9BZV3 1241 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TRIM9Q9C026 710 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 DMAP1Q9NPF5 467 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ARHGEF4Q9NR80 690 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 DEC1Q9P2X7 70 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 EVLQ9UI08 416 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CFAP45Q9UL16 551 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TBC1D3BA6NDS4 549 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF217O75362 1048 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 KAT7O95251 611 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 RPN1P04843 607 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 LMO2P25791 158 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CYP2J2P51589 502 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CYP24A1Q07973 514 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 IFRD2Q12894 506 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 LYPD4Q6UWN0 246 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CBWD2Q8IUF1 395 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 C12orf56Q8IXR9 622 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 HDDC3Q8N4P3 179 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 B3GALNT2Q8NCR0 500 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 OR5B17Q8NGF7 314 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 KBTBD7Q8WVZ9 684 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TAF4BQ92750 862 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC127Q96BQ5 260 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 DHX58Q96C10 678 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC34Q96HJ3 373 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 USP28Q96RU2 1077 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CDK5RAP1Q96SZ6 601 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 ZFYVE1Q9HBF4 777 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CBX8Q9HC52 389 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CRTAC1Q9NQ79 661 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 TLR8Q9NR97 1041 aaKnown RBP7.68□□□□□ -1.18
BRCA1-214ENST00000477152 AGPAT3Q9NRZ7 376 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 C2orf42Q9NWW7 574 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 CFAP97Q9P2B7 532 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 WDR35Q9P2L0 1181 aa7.68□□□□□ -1.18
BRCA1-214ENST00000477152 A0A0A0MRY4 1105 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 C4orf47A7E2U8 309 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 K7EQS6 105 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 TM4SF5O14894 197 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 ATP2C2O75185 946 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 KLF8O95600 359 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-214ENST00000477152 OLFM2O95897 454 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 CYP17A1P05093 508 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 SYPP08247 313 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 OPRD1P41143 372 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 CCDC6Q16204 474 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 KNOP1Q1ED39 458 aaKnown RBP7.67□□□□□ -1.18
BRCA1-214ENST00000477152 SGSM1Q2NKQ1 1148 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 ZNF699Q32M78 642 aa7.67□□□□□ -1.18
BRCA1-214ENST00000477152 SYT12Q8IV01 421 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms