RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
APTX-220ENST00000476858 DMDP11532 3685 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 TMCO5BA8MYB1 307 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 K7ESF4 209 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.344e-13■□□□□ 9.3
APTX-220ENST00000476858 KAT7O95251 611 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 LSM8O95777 96 aaKnown RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 PENKP01210 267 aaPredicted RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 SP9P0CG40 484 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 FERP16591 822 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 PXNP49023 591 aaPredicted RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 CSTF1Q05048 431 aaKnown RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 GRSF1Q12849 480 aaKnown RBP eCLIP12.94□□□□□ -0.34
APTX-220ENST00000476858 NR1H3Q13133 447 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 C2orf27AQ580R0 203 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 MON1BQ7L1V2 547 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 CCDC33Q8N5R6 958 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 MSANTD3Q96H12 275 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 PNKPQ96T60 521 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 ACOX2Q99424 681 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 NPY6RQ99463 290 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 HAUS4Q9H6D7 363 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 SYNCQ9H7C4 482 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 PRMT8Q9NR22 394 aaPredicted RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 ARHGEF4Q9NR80 690 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 PIGVQ9NUD9 493 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 SEPT11Q9NVA2 429 aaKnown RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 DNAJC17Q9NVM6 304 aaKnown RBP12.94□□□□□ -0.34
APTX-220ENST00000476858 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
APTX-220ENST00000476858 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CAPN9O14815 690 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CACNG3O60359 315 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 ACSL4O60488 711 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 HSF2BPO75031 334 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CAVIN2O95810 425 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 HOXD9P28356 352 aaPredicted RBP12.93□□□□□ -0.34
APTX-220ENST00000476858 EMP3P54852 163 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 RPS24P62847 133 aaKnown RBP12.93□□□□□ -0.34
APTX-220ENST00000476858 CENPCQ03188 943 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 NME3Q13232 169 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 SRSF5Q13243 272 aaKnown RBP12.93□□□□□ -0.34
APTX-220ENST00000476858 ASIC2Q16515 512 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 EFHC1Q5JVL4 640 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 PIK3R6Q5UE93 754 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 RAP1GAP2Q684P5 730 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 TMEM215Q68D42 235 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 BEND5Q7L4P6 421 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 C14orf80Q86SX3 495 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CIR1Q86X95 450 aaPredicted RBP12.93□□□□□ -0.34
APTX-220ENST00000476858 ZNF677Q86XU0 584 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 IPO4Q8TEX9 1081 aaKnown RBP12.93□□□□□ -0.34
APTX-220ENST00000476858 USP33Q8TEY7 942 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 GOLGA1Q92805 767 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CFAP57Q96MR6 1250 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 FAM204AQ9H8W3 233 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 DDIT4Q9NX09 232 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 STOML2Q9UJZ1 356 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 DAAM1Q9Y4D1 1078 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
APTX-220ENST00000476858 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 M0QYT0 321 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 SART1O43290 800 aaKnown RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 ADAM23O75077 832 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 ADCY5O95622 1261 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 GLI1P08151 1106 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 DRD1P21728 446 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 CASP14P31944 242 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 WASP42768 502 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 HARS2P49590 506 aaKnown RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 SULT1E1P49888 294 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 TPM4P67936 248 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 OGDHQ02218 1023 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 RING1Q06587 406 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 LRRC32Q14392 662 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 C15orf59Q2T9L4 293 aaPredicted RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 FIGNQ5HY92 759 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 ADGRF1Q5T601 910 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 PHF13Q86YI8 300 aaPredicted RBP12.92□□□□□ -0.34
APTX-220ENST00000476858 CPXM2Q8N436 756 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 SORCS1Q8WY21 1168 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
APTX-220ENST00000476858 SERPINB11Q96P15 392 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms