RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 OR6B3Q8NGW1 331 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 PCED1BQ96HM7 432 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 ZNF518BQ9C0D4 1074 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
CHD6-207ENST00000476641 TASP1Q9H6P5 420 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 MMRN2Q9H8L6 949 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 TRPV4Q9HBA0 871 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 ATP13A1Q9HD20 1204 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 RBM12Q9NTZ6 932 aaKnown RBP8.42□□□□□ -1.06
CHD6-207ENST00000476641 GTSE1Q9NYZ3 720 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 USP25Q9UHP3 1055 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 ASB3Q9Y575 518 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 PIAS3Q9Y6X2 628 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 R4GN57 208 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 CEP250Q9BV73 2442 aa8.42□□□□□ -1.06
CHD6-207ENST00000476641 OTOL1A6NHN0 477 aaPredicted RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 SCAMP3O14828 347 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 ZNF263O14978 683 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 NOL4O94818 638 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 CCNE1P24864 410 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 PCSK1P29120 753 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 GNL1P36915 607 aaPredicted RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 LHX1P48742 406 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 PMS1P54277 932 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 SNRPFP62306 86 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 TNNC1P63316 161 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 PFKPQ01813 784 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 PPP3CAQ08209 521 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 PSMD2Q13200 908 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 TRPC3Q13507 836 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 BECN1Q14457 450 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 NFE2Q16621 373 aaPredicted RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 ZNF699Q32M78 642 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 ZCWPW2Q504Y3 356 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 ISM2Q6H9L7 571 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 MFSD6LQ8IWD5 586 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 ENGASEQ8NFI3 743 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 C2orf15Q8WU43 125 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 USP13Q92995 863 aaPredicted RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 CYP2S1Q96SQ9 504 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 B3GNT5Q9BYG0 378 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 BCO2Q9BYV7 579 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 SNX25Q9H3E2 840 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 APOBEC3GQ9HC16 384 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 TRPC7Q9HCX4 862 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 C2orf42Q9NWW7 574 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 HSFX1Q9UBD0 423 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 CDH9Q9ULB4 789 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 R3HCC1Q9Y3T6 440 aaKnown RBP8.41□□□□□ -1.06
CHD6-207ENST00000476641 ATP6V1DQ9Y5K8 247 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 TCHHQ07283 1943 aa8.41□□□□□ -1.06
CHD6-207ENST00000476641 SPTBN2O15020 2390 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 C2orf78A6NCI8 922 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 A8MXQ7 604 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 F8VP50 259 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 PDXKO00764 312 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 TACC1O75410 805 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 HLA-DRAP01903 254 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 SP9P0CG40 484 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 ARSAP15289 507 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 PTPN1P18031 435 aaKnown RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 NR2F2P24468 414 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 CDC25CP30307 473 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 BUD31P41223 144 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 GCLMP48507 274 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 FCHO2Q0JRZ9 810 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 SMARCB1Q12824 385 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 IFRD2Q12894 506 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 ZACNQ401N2 412 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 ARHGAP15Q53QZ3 475 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 Q6ZS52 159 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 C12orf40Q86WS4 652 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 C1orf210Q8IVY1 113 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 YAF2Q8IY57 180 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 CMTM8Q8IZV2 173 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 ARL14EPQ8N8R7 260 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 GOLGA5Q8TBA6 731 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 MYCBPAPQ8TBZ2 947 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 TAS1R2Q8TE23 839 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 DEPDC1BQ8WUY9 529 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 DNASE1L2Q92874 299 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 CHFRQ96EP1 664 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 SHDQ96IW2 340 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 GCNAQ96QF7 691 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 TWNKQ96RR1 684 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 PRRX2Q99811 253 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 HPS4Q9NQG7 708 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 POLR3BQ9NW08 1133 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 SPATA6Q9NWH7 488 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 CACNA2D2Q9NY47 1150 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 MAGEC2Q9UBF1 373 aaPredicted RBP8.4□□□□□ -1.06
CHD6-207ENST00000476641 TRAF3IP3Q9Y228 551 aa8.4□□□□□ -1.06
CHD6-207ENST00000476641 TRIM49BA6NDI0 452 aa8.39□□□□□ -1.07
CHD6-207ENST00000476641 PRR23AA6NEV1 266 aa8.39□□□□□ -1.07
CHD6-207ENST00000476641 ANTXRLA6NF34 631 aa8.39□□□□□ -1.07
CHD6-207ENST00000476641 CALUO43852 315 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms