RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 PPP2R5DQ14738 602 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 LEXMQ3ZCV2 418 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 ATP13A4Q4VNC1 1196 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 FAM78AQ5JUQ0 283 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 MEI1Q5TIA1 1274 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 GET4Q7L5D6 327 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-206ENST00000474648 FAM131BQ86XD5 332 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SYCE1Q8N0S2 351 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SLC35F6Q8N357 371 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 CCDC185Q8N715 623 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 TRIM58Q8NG06 486 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 ZSCAN18Q8TBC5 510 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-206ENST00000474648 RSPRY1Q96DX4 576 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 NCAPGQ9BPX3 1015 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 NACA2Q9H009 215 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 WDCPQ9H6R7 721 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 TRPV4Q9HBA0 871 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 PRDM6Q9NQX0 595 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 TMPRSS4Q9NRS4 437 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 TMEM51Q9NW97 253 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SMPD4Q9NXE4 827 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 AMFRQ9UKV5 643 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 USP18Q9UMW8 372 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 RARAP10276 462 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 LAMP2P13473 410 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 FCARP24071 287 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 CTNNA2P26232 953 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 CCR1P32246 355 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 AVPR1AP37288 418 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 VIPR2P41587 438 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 ARSEP51690 589 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 GNG11P61952 73 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 CA9Q16790 459 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 BOLA3Q53S33 107 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 BRMS1LQ5PSV4 323 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 LRRC38Q5VT99 294 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 Q6ZNB5 142 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 HTR3DQ70Z44 454 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 SND1Q7KZF4 910 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 KRT35Q92764 455 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 SMARCD2Q92925 531 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 AZIN2Q96A70 460 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 NTAN1Q96AB6 310 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 PLD4Q96BZ4 506 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 HES6Q96HZ4 224 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 ASB16Q96NS5 453 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 WDR24Q96S15 920 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 TLR10Q9BXR5 811 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 TKTL2Q9H0I9 626 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 SLITRK6Q9H5Y7 841 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 CFAP97Q9P2B7 532 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 XPO7Q9UIA9 1087 aaKnown RBP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 AGO1Q9UL18 857 aaKnown RBP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 FZD10Q9ULW2 581 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 PACSIN2Q9UNF0 486 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 PCDHA3Q9Y5H8 950 aa10.39□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
COL8A1-206ENST00000474648 GOLGA6L7A0A1B0GV03 622 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SPOPO43791 374 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PRPSAP2O60256 369 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PAGE1O75459 146 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 IRF1P10914 325 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SLC2A3P11169 496 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 TNNT1P13805 278 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 DESP17661 470 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 CTNNA1P35221 906 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SSR1P43307 286 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 MARCKSL1P49006 195 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 MLLT6P55198 1093 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ETF1P62495 437 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 SCAPQ12770 1279 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF77Q15935 545 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 HADHQ16836 314 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 KCNT1Q5JUK3 1230 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ERMARDQ5T6L9 678 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 NADSYN1Q6IA69 706 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 TANGO2Q6ICL3 276 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PEX26Q7Z412 305 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 POLNQ7Z5Q5 900 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 PSTKQ8IV42 348 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 UNC45BQ8IWX7 931 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 RHOT1Q8IXI2 618 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 CELF5Q8N6W0 485 aaKnown RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ST13P5Q8NFI4 369 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-206ENST00000474648 FAM71BQ8TC56 605 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 UBE2Q2Q8WVN8 375 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 TEKT4Q8WW24 435 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 RAPGEF5Q92565 580 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ALG3Q92685 438 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 RNF34Q969K3 372 aa10.38□□□□□ -0.75
COL8A1-206ENST00000474648 ALS2CR12Q96Q35 445 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms