RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PIGKQ92643 395 aa19.36■□□□□ 0.69
COL7A1-209ENST00000474432 EDEM2Q9BV94 578 aa19.36■□□□□ 0.69
COL7A1-209ENST00000474432 SLC4A5Q9BY07 1137 aa19.36■□□□□ 0.69
COL7A1-209ENST00000474432 MIS12Q9H081 205 aa19.36■□□□□ 0.69
COL7A1-209ENST00000474432 ELOVL2Q9NXB9 296 aa19.36■□□□□ 0.69
COL7A1-209ENST00000474432 GOLGA6L7A0A1B0GV03 622 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 KHNYNO15037 678 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 MAP3K13O43283 966 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 FBXO21O94952 628 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 FGFR1OPO95684 399 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 HLA-FP30511 346 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 SLC6A4P31645 630 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 BYSLQ13895 437 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 ZNF234Q14588 700 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 MEA1Q16626 185 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 FUT11Q495W5 492 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 FAM133BQ5BKY9 247 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 IL31Q6EBC2 164 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 NADSYN1Q6IA69 706 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 DPY19L2P1Q6NXN4 242 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 ANKS1BQ7Z6G8 1248 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 MLKLQ8NB16 471 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 MYEOVQ96EZ4 313 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 LSM14BQ9BX40 385 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 MKRN2Q9H000 416 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 CLSTN2Q9H4D0 955 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 SIX2Q9NPC8 291 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 EVLQ9UI08 416 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 AJAP1Q9UKB5 411 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 PILRBQ9UKJ0 227 aa19.35■□□□□ 0.69
COL7A1-209ENST00000474432 ASCC3Q8N3C0 2202 aaKnown RBP19.35■□□□□ 0.69
COL7A1-209ENST00000474432 ADAMTS9Q9P2N4 1935 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 C4orf47A7E2U8 309 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 KRT5P13647 590 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 ITPKAP23677 461 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 RING1Q06587 406 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 SYT12Q8IV01 421 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 SLC41A1Q8IVJ1 513 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 WDTC1Q8N5D0 677 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 DEFB119Q8N690 84 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL7A1-209ENST00000474432 WFDC5Q8TCV5 224 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 DQX1Q8TE96 717 aaKnown RBP19.34■□□□□ 0.69
COL7A1-209ENST00000474432 STK32AQ8WU08 396 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 TMA16Q96EY4 203 aaKnown RBP19.34■□□□□ 0.69
COL7A1-209ENST00000474432 SLC39A13Q96H72 371 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 FCRL2Q96LA5 508 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-209ENST00000474432 TJP2Q9UDY2 1190 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 CYP8B1Q9UNU6 501 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 NAALADL1Q9UQQ1 740 aa19.34■□□□□ 0.69
COL7A1-209ENST00000474432 PCDH15Q96QU1 1955 aa19.33■□□□□ 0.69
COL7A1-209ENST00000474432 ACACBO00763 2458 aa19.33■□□□□ 0.69
COL7A1-209ENST00000474432 ATXN2Q99700 1313 aaKnown RBP19.33■□□□□ 0.69
COL7A1-209ENST00000474432 NPC1O15118 1278 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 PAPSS1O43252 624 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 PRKCHP24723 683 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 PON1P27169 355 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 RPL6Q02878 288 aaKnown RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 EIF4HQ15056 248 aaKnown RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 PIK3R6Q5UE93 754 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 SYPL2Q5VXT5 272 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 LYSMD4Q5XG99 296 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 RFWD3Q6PCD5 774 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 ENOSF1Q7L5Y1 443 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 TMEM110Q86TL2 294 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 METTL3Q86U44 580 aaKnown RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 ADIPOR2Q86V24 386 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 DDX1Q92499 740 aaKnown RBP19.33■□□□□ 0.68
COL7A1-209ENST00000474432 SHC3Q92529 594 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 AZIN2Q96A70 460 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 LMLNQ96KR4 655 aa19.33■□□□□ 0.68
COL7A1-209ENST00000474432 GTPBP10A4D1E9 387 aaKnown RBP19.32■□□□□ 0.68
COL7A1-209ENST00000474432 ACSL4O60488 711 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 ZNF217O75362 1048 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 NCAM1P13591 858 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 COPAP53621 1224 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 TBX4P57082 545 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 ZNF445P59923 1031 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 EIF4EBP2Q13542 120 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-209ENST00000474432 DPCR1Q3MIW9 517 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 SLC36A4Q6YBV0 504 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 GBP6Q6ZN66 633 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 BEND5Q7L4P6 421 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 PRICKLE1Q96MT3 831 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-209ENST00000474432 ST7Q9NRC1 585 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 USP36Q9P275 1121 aaKnown RBP19.32■□□□□ 0.68
COL7A1-209ENST00000474432 APEX2Q9UBZ4 518 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 CHD8Q9HCK8 2581 aa19.32■□□□□ 0.68
COL7A1-209ENST00000474432 KCNJ18B7U540 433 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 E5RJQ4 531 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 AP5Z1O43299 807 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 THAP12O43422 761 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 TIMM44O43615 452 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 IGLV3-25P01717 112 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 C7P10643 843 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 GNA15P30679 374 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 ACADSBP45954 432 aa19.31■□□□□ 0.68
COL7A1-209ENST00000474432 PITX1P78337 314 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-209ENST00000474432 ZNF33AQ06730 810 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms