RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TPM1P09493 284 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 CASP14P31944 242 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 FLT3P36888 993 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 SGSHP51688 502 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 NRLP54845 237 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 ASIC2Q16515 512 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 RAB6CQ53S08 254 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 DCAF6Q58WW2 860 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
TPM3-216ENST00000473036 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 PKN3Q6P5Z2 889 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 Q6ZS52 159 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 MON1BQ7L1V2 547 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
TPM3-216ENST00000473036 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 CPA6Q8N4T0 437 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 DCLK2Q8N568 766 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 PLD4Q96BZ4 506 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 C11orf70Q9BRQ4 267 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 RAB6CQ9H0N0 254 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 SPHK2Q9NRA0 654 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 TBC1D14Q9P2M4 693 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 STOML2Q9UJZ1 356 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 CDV3Q9UKY7 258 aaKnown RBP13.66□□□□□ -0.22
TPM3-216ENST00000473036 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 CEP83Q9Y592 693 aa13.66□□□□□ -0.22
TPM3-216ENST00000473036 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.222e-10■■■■□ 20.1
TPM3-216ENST00000473036 GOLGA6L7A0A1B0GV03 622 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 GOLGA8SH3BPF8 625 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 MAN2B1O00754 1011 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 SLC9A3R1O14745 358 aaPredicted RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 IRAK2O43187 625 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 HSF2BPO75031 334 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 LRP3O75074 770 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 DAB1O75553 588 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 ADH5P11766 374 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 SLC6A4P31645 630 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 TBX4P57082 545 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 TRIM14Q14142 442 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 EFHC1Q5JVL4 640 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 FYB2Q5VWT5 728 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 TPGS1Q6ZTW0 290 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 BNIPLQ7Z465 357 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 NAT16Q8N8M0 369 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 JOSD2Q8TAC2 188 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 NPY6RQ99463 290 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 SYNCQ9H7C4 482 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 PRMT8Q9NR22 394 aaPredicted RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 MARK1Q9P0L2 795 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 HCN2Q9UL51 889 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.22
TPM3-216ENST00000473036 SMG5Q9UPR3 1016 aaKnown RBP13.65□□□□□ -0.22
TPM3-216ENST00000473036 LAMA1P25391 3075 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 K7EQS6 105 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 CAPN9O14815 690 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 FOXD2O60548 495 aaPredicted RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 CDC25BP30305 580 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 ZBED6P86452 979 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 CSTF1Q05048 431 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 RING1Q06587 406 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 TBX2Q13207 712 aaPredicted RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 ZC3H12AQ5D1E8 599 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 FAM102AQ5T9C2 384 aaPredicted RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 SPECC1LQ69YQ0 1117 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 ACAD10Q6JQN1 1059 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 TOGARAM2Q6ZUX3 1019 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 ZDHHC17Q8IUH5 632 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 EMC1Q8N766 993 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 IPO4Q8TEX9 1081 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 BHMTQ93088 406 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 P2RY13Q9BPV8 354 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 METTL5Q9NRN9 209 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 SEPT11Q9NVA2 429 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 ARHGAP20Q9P2F6 1191 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 LSM7Q9UK45 103 aaKnown RBP13.64□□□□□ -0.23
TPM3-216ENST00000473036 TLR6Q9Y2C9 796 aa13.64□□□□□ -0.23
TPM3-216ENST00000473036 TMCO5BA8MYB1 307 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 PENKP01210 267 aaPredicted RBP13.63□□□□□ -0.23
TPM3-216ENST00000473036 CISD3P0C7P0 127 aa13.63□□□□□ -0.23
TPM3-216ENST00000473036 TYRP14679 529 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms