RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 CKBP12277 381 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 RPA3P35244 121 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ADRA1BP35368 520 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 GRIK1P39086 918 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 OR1G1P47890 313 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 RAB27AP51159 221 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 CORO7P57737 925 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 TUSC3Q13454 348 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 KBTBD12Q3ZCT8 623 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ANKRD20A2Q5SQ80 823 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ANKRD20A1Q5TYW2 823 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ANKRD20A3Q5VUR7 823 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 OTUD1Q5VV17 481 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 CCSAPQ6IQ19 270 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 CASC4Q6P4E1 433 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 PPP1R21Q6ZMI0 780 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 CCDC121Q6ZUS5 278 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 FAM47EQ6ZV65 393 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ARCQ7LC44 396 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ECHDC2Q86YB7 292 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ZNF280BQ86YH2 543 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 SCN4BQ8IWT1 228 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 THEM5Q8N1Q8 247 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 RIBC1Q8N443 379 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 PPM1NQ8N819 430 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 COLGALT1Q8NBJ5 622 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ZNF784Q8NCA9 323 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 DEPDC1BQ8WUY9 529 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 HTR3CQ8WXA8 447 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 TGS1Q96RS0 853 aaKnown RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 RTP3Q9BQQ7 232 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 C12orf65Q9H3J6 166 aaKnown RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 WDCPQ9H6R7 721 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ZC3H7BQ9UGR2 993 aaKnown RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 SRRDQ9UH36 339 aa5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 ZMYND8Q9ULU4 1186 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 MAGED2Q9UNF1 606 aaPredicted RBP5.03□□□□□ -1.6
TM4SF1-202ENST00000472441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TCRBV9S1A1TA0A576 114 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 E7ESA3 106 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 KCNK1O00180 336 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TOMM70O94826 608 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 FBXO21O94952 628 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 INHBAP08476 426 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 VAV1P15498 845 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ERCC2P18074 760 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 HOXD10P28358 340 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 NR2C2P49116 596 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TPI1P60174 286 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CRADDP78560 199 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 GRIK3Q13003 919 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 DSC3Q14574 896 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 KLHL38Q2WGJ6 581 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SDHAF4Q5VUM1 108 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 PID1Q7Z2X4 250 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 PRPF39Q86UA1 669 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 RTN4RL1Q86UN2 441 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CAND1Q86VP6 1230 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 AGGF1Q8N302 714 aaeCLIP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ANKS4BQ8N8V4 417 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CCDC197Q8NCU1 140 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 OR10T2Q8NGX3 314 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 RSPH1Q8WYR4 309 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 AGAP3Q96P47 875 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 FAM193BQ96PV7 902 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CYTH2Q99418 400 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ACBD6Q9BR61 282 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 NSRP1Q9H0G5 558 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TKTL2Q9H0I9 626 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 PRDM12Q9H4Q4 367 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CNGB3Q9NQW8 809 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 EURLQ9NYK6 297 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SLC24A2Q9UI40 661 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TEX264Q9Y6I9 313 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ZNF638Q14966 1978 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 GOLGA4Q13439 2230 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TTC3P53804 2025 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 H0YHG0 523 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 I6L893 689 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SMAPO00193 183 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 DDHD2O94830 711 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 CPP00450 1065 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 MT-ND3P03897 115 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 FAM163BP0C2L3 166 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ARPP19P56211 112 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 WDR4P57081 412 aaKnown RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 IL9RQ01113 521 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 TSPY1Q01534 308 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 YWHAHQ04917 246 aaPredicted RBP5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 NR1H3Q13133 447 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 XRCC4Q13426 336 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SPARCL1Q14515 664 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 SLC1A5Q15758 541 aa5.02□□□□□ -1.61
TM4SF1-202ENST00000472441 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms