RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ERMARDQ5T6L9 678 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 LRRC31Q6UY01 552 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 HTR3DQ70Z44 454 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 PSTKQ8IV42 348 aaKnown RBP17.49■□□□□ 0.39
CCM2-205ENST00000472223 DENND1CQ8IV53 801 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 RHOT1Q8IXI2 618 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 ZDHHC14Q8IZN3 488 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 DEPDC1BQ8WUY9 529 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
CCM2-205ENST00000472223 SLC39A13Q96H72 371 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 FCRL2Q96LA5 508 aaPredicted RBP17.49■□□□□ 0.39
CCM2-205ENST00000472223 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 KCND1Q9NSA2 647 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 ARHGEF38Q9NXL2 777 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 PRKAG3Q9UGI9 489 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 A0A0U1RQJ8 604 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 ECI2O75521 394 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 PRAMEF12O95522 483 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 IGLV3-27P01718 113 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 ADRA1BP35368 520 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 BNIPLQ7Z465 357 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 MAP7D3Q8IWC1 876 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 UBL4BQ8N7F7 174 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 ATRIPQ8WXE1 791 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 NTAN1Q96AB6 310 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 OTUB2Q96DC9 234 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 ZFRQ96KR1 1074 aaKnown RBP17.48■□□□□ 0.39
CCM2-205ENST00000472223 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 PRDM6Q9NQX0 595 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 DDX56Q9NY93 547 aaKnown RBP17.48■□□□□ 0.39
CCM2-205ENST00000472223 CCL26Q9Y258 94 aa17.48■□□□□ 0.39
CCM2-205ENST00000472223 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 C2CD4DB7Z1M9 353 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 ACSL4O60488 711 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 CYBBP04839 570 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 PSMC3P17980 439 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 GJC1P36383 396 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 CETN2P41208 172 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 ATXN1P54253 815 aaKnown RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 USP4Q13107 963 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 EIF4EBP2Q13542 120 aaPredicted RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 KRT81Q14533 505 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 ZNF77Q15935 545 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 ZNF569Q5MCW4 686 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 LRRC38Q5VT99 294 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 OTUD1Q5VV17 481 aaPredicted RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 TANGO2Q6ICL3 276 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 CCDC117Q8IWD4 279 aaPredicted RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 MFSD6LQ8IWD5 586 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 TEKT4Q8WW24 435 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 TRMT61BQ9BVS5 477 aaKnown RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 SIK2Q9H0K1 926 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 DUS2Q9NX74 493 aaKnown RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 STIM2Q9P246 746 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 IGSF9Q9P2J2 1179 aa17.47■□□□□ 0.39
CCM2-205ENST00000472223 AGO1Q9UL18 857 aaKnown RBP17.47■□□□□ 0.39
CCM2-205ENST00000472223 CCDC66A2RUB6 948 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 MIF4GDA9UHW6 222 aaKnown RBP17.46■□□□□ 0.39
CCM2-205ENST00000472223 F5H5T6 163 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 PSTPIP1O43586 416 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 PAGE1O75459 146 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 IL9P15248 144 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
CCM2-205ENST00000472223 NR1H3Q13133 447 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 PDGFRLQ15198 375 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 PARM1Q6UWI2 310 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 POLNQ7Z5Q5 900 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 CHSY1Q86X52 802 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 KCTD6Q8NC69 237 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 HSPH1Q92598 858 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 C1orf74Q96LT6 269 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 EPAS1Q99814 870 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 KXD1Q9BQD3 176 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 OSBPL2Q9H1P3 480 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 DHX35Q9H5Z1 703 aaKnown RBP17.46■□□□□ 0.39
CCM2-205ENST00000472223 CALCOCO1Q9P1Z2 691 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 LIMD1Q9UGP4 676 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 FZD10Q9ULW2 581 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 AP4E1Q9UPM8 1137 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 HYOU1Q9Y4L1 999 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 CAPN6Q9Y6Q1 641 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 DOCK8Q8NF50 2099 aa17.46■□□□□ 0.39
CCM2-205ENST00000472223 DAPK3O43293 454 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 ARL4AP40617 200 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 GNG11P61952 73 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 SCAPQ12770 1279 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 RABGAP1LQ5R372 815 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 ZSCAN30Q86W11 494 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 ADHFE1Q8IWW8 467 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 LRRC57Q8N9N7 239 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 OSCP1Q8WVF1 389 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 ATP2A3Q93084 1043 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 IRX2Q9BZI1 471 aaPredicted RBP17.45■□□□□ 0.38
CCM2-205ENST00000472223 OR12D3Q9UGF7 316 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 NUMBLQ9Y6R0 609 aa17.45■□□□□ 0.38
CCM2-205ENST00000472223 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
CCM2-205ENST00000472223 ANHXE9PGG2 379 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms