RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRKCB-205ENST00000472066 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 FAM217AQ8IXS0 508 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 CPXM2Q8N436 756 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 CTNNBL1Q8WYA6 563 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-205ENST00000472066 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
PRKCB-205ENST00000472066 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 RAB6CQ9H0N0 254 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 EPHX3Q9H6B9 360 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 WDCPQ9H6R7 721 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 C8orf33Q9H7E9 229 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-205ENST00000472066 SLC12A6Q9UHW9 1150 aa12.8□□□□□ -0.36
PRKCB-205ENST00000472066 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-205ENST00000472066 SPECC1L-ADORA2AF8WAN1 911 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 CCP110O43303 1012 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 NDUFA10O95299 355 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 ADH1CP00326 375 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 CYP17A1P05093 508 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 GJA4P35212 333 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 MAGEA1P43355 309 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 SOX9P48436 509 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 PRKCQQ04759 706 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 GAD2Q05329 585 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 SPA17Q15506 151 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 MLF2Q15773 248 aaPredicted RBP12.79□□□□□ -0.36
PRKCB-205ENST00000472066 CDO1Q16878 200 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 BRMS1LQ5PSV4 323 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 NADSYN1Q6IA69 706 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 SIX5Q8N196 739 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 FNIP1Q8TF40 1166 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
PRKCB-205ENST00000472066 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 TRIM7Q9C029 511 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 TKTL2Q9H0I9 626 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 ARHGEF3Q9NR81 526 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 ARHGEF38Q9NXL2 777 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 XPO7Q9UIA9 1087 aaKnown RBP12.79□□□□□ -0.36
PRKCB-205ENST00000472066 INTUQ9ULD6 942 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 PAXBP1Q9Y5B6 917 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 PCDHA13Q9Y5I0 950 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 PIAS3Q9Y6X2 628 aa12.79□□□□□ -0.36
PRKCB-205ENST00000472066 SHISA7A6NL88 538 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 GFRA2O00451 464 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 TSPAN3O60637 253 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 ADH5P11766 374 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 PSMA2P25787 234 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 SLC6A4P31645 630 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 HDAC4P56524 1084 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 STARD6P59095 220 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 AMPD2Q01433 879 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 MTA1Q13330 715 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 GAB4Q2WGN9 574 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 FAM133BQ5BKY9 247 aaKnown RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 TPRG1Q6ZUI0 275 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 RALGPS2Q86X27 583 aaPredicted RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 FAM131BQ86XD5 332 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 CHFRQ96EP1 664 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 MSANTD3Q96H12 275 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 SHDQ96IW2 340 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 DDX50Q9BQ39 737 aaKnown RBP12.78□□□□□ -0.36
PRKCB-205ENST00000472066 ANLNQ9NQW6 1124 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 MARK1Q9P0L2 795 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
PRKCB-205ENST00000472066 TMEM221A6NGB7 291 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 I6L893 689 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-205ENST00000472066 M0R296 226 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 PAGE1O75459 146 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 CYBBP04839 570 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 DESP17661 470 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 CD72P21854 359 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 CTHP32929 405 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 ADRA1BP35368 520 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 GALK1P51570 392 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 ACAP1Q15027 740 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 ANO4Q32M45 955 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 MPPE1Q53F39 396 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 MS4A13Q5J8X5 152 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 PIK3R6Q5UE93 754 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 FYB2Q5VWT5 728 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 RAP1GAP2Q684P5 730 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 SCYL2Q6P3W7 929 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 RFWD3Q6PCD5 774 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 TXNDC11Q6PKC3 985 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 LRRC8AQ8IWT6 810 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
PRKCB-205ENST00000472066 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
PRKCB-205ENST00000472066 FAM3CQ92520 227 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms