RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
HDAC6-218ENST00000470942 TAF5Q15542 800 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 ANO6Q4KMQ2 910 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 USP39Q53GS9 565 aaKnown RBP16.33■□□□□ 0.2
HDAC6-218ENST00000470942 EFHC1Q5JVL4 640 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 BEND5Q7L4P6 421 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 TAC4Q86UU9 113 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 KBTBD6Q86V97 674 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 CHPFQ8IZ52 775 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 FAM160A2Q8N612 972 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-218ENST00000470942 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.2
HDAC6-218ENST00000470942 FCRL2Q96LA5 508 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-218ENST00000470942 ACOX2Q99424 681 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 GANQ9H2C0 597 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 STOML2Q9UJZ1 356 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 CLEC4EQ9ULY5 219 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 USP18Q9UMW8 372 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 INVSQ9Y283 1065 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 TLR6Q9Y2C9 796 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 F8VZ95 297 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 DCLK1O15075 740 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 GRAP2O75791 330 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 TRUB2O95900 331 aaKnown RBP16.32■□□□□ 0.2
HDAC6-218ENST00000470942 MOCS2O96007 188 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-218ENST00000470942 UBXN1Q04323 297 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 NNTQ13423 1086 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 NCAPHQ15003 741 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 SYCP1Q15431 976 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 DCAF6Q58WW2 860 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 RFWD3Q6PCD5 774 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 THADAQ6YHU6 1953 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 FAM183BPQ6ZVS7 135 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 ANKS1BQ7Z6G8 1248 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 DEFB106AQ8N104 65 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
HDAC6-218ENST00000470942 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 MDGA1Q8NFP4 955 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 UCMAQ8WVF2 138 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 AZIN2Q96A70 460 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 ERLEC1Q96DZ1 483 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 PIWIL1Q96J94 861 aaKnown RBP16.32■□□□□ 0.2
HDAC6-218ENST00000470942 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
HDAC6-218ENST00000470942 SLC2A11Q9BYW1 496 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 NLRC4Q9NPP4 1024 aa16.32■□□□□ 0.2
HDAC6-218ENST00000470942 SYNJ2BP-COX16A0A087WUM0 186 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 FAM170AA1A519 330 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 LGALS16A8MUM7 142 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 ZBTB24O43167 697 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-218ENST00000470942 TBL1XO60907 577 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 HSF2BPO75031 334 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 GFPT2O94808 682 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 APOEP02649 317 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 ERBB2P04626 1255 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 GLI1P08151 1106 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 HOXD9P28356 352 aaPredicted RBP16.31■□□□□ 0.2
HDAC6-218ENST00000470942 SLC6A4P31645 630 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 GBP1P32455 592 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 CDK17Q00537 523 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 SLC6A3Q01959 620 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 PTPN20Q4JDL3 420 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 PIK3R6Q5UE93 754 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 NOP9Q86U38 636 aaKnown RBP16.31■□□□□ 0.2
HDAC6-218ENST00000470942 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 SLC39A13Q96H72 371 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 ASNSD1Q9NWL6 643 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 COX16Q9P0S2 106 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 STIM2Q9P246 746 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 SIK3Q9Y2K2 1263 aa16.31■□□□□ 0.2
HDAC6-218ENST00000470942 ABCA7Q8IZY2 2146 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 TYW5A2RUC4 315 aaKnown RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 WASH3PC4AMC7 463 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 GFRA2O00451 464 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 IRAK2O43187 625 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 RHOBTB1O94844 696 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF18P17022 549 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 SGSHP51688 502 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 PITX1P78337 314 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ARID5AQ03989 594 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ELF2Q15723 593 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 PLK5Q496M5 336 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 FAM133BQ5BKY9 247 aaKnown RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 NADSYN1Q6IA69 706 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ERICH1Q86X53 443 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 DDX1Q92499 740 aaKnown RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 RNF34Q969K3 372 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 SLC2A13Q96QE2 648 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 CIPCQ9C0C6 399 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 DUSP15Q9H1R2 295 aaPredicted RBP16.3■□□□□ 0.2
HDAC6-218ENST00000470942 PARD6AQ9NPB6 346 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 ELOVL2Q9NXB9 296 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 SLC12A6Q9UHW9 1150 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms